Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Sdc4O35988 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sdc4O35988 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.35□□□□□ -0.43
Sdc4O35988 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sdc4O35988 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sdc4O35988 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sdc4O35988 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sdc4O35988 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sdc4O35988 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.35□□□□□ -0.43
Sdc4O35988 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sdc4O35988 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sdc4O35988 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sdc4O35988 Gm12165-201ENSMUST00000117047 342 ntBASIC12.35□□□□□ -0.43
Sdc4O35988 Gm13045-201ENSMUST00000119019 712 ntBASIC12.35□□□□□ -0.43
Sdc4O35988 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sdc4O35988 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sdc4O35988 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sdc4O35988 Gm9555-201ENSMUST00000200908 583 ntBASIC12.35□□□□□ -0.43
Sdc4O35988 Gm17931-201ENSMUST00000208132 634 ntBASIC12.35□□□□□ -0.43
Sdc4O35988 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.35□□□□□ -0.43
Sdc4O35988 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.35□□□□□ -0.43
Sdc4O35988 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sdc4O35988 Ntng1-201ENSMUST00000051253 327 ntBASIC12.35□□□□□ -0.43
Sdc4O35988 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sdc4O35988 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sdc4O35988 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sdc4O35988 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sdc4O35988 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.35□□□□□ -0.43
Sdc4O35988 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sdc4O35988 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sdc4O35988 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sdc4O35988 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sdc4O35988 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Sdc4O35988 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sdc4O35988 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sdc4O35988 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sdc4O35988 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.35□□□□□ -0.43
Sdc4O35988 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.35□□□□□ -0.43
Sdc4O35988 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sdc4O35988 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sdc4O35988 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc4O35988 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc4O35988 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc4O35988 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc4O35988 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.34□□□□□ -0.43
Sdc4O35988 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc4O35988 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc4O35988 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc4O35988 Gm12616-201ENSMUST00000118594 382 ntBASIC12.34□□□□□ -0.43
Sdc4O35988 Gm15004-201ENSMUST00000119192 630 ntBASIC12.34□□□□□ -0.43
Sdc4O35988 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Sdc4O35988 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc4O35988 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.34□□□□□ -0.43
Sdc4O35988 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc4O35988 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc4O35988 Gm12624-201ENSMUST00000177615 382 ntBASIC12.34□□□□□ -0.43
Sdc4O35988 Gm12621-201ENSMUST00000177760 382 ntBASIC12.34□□□□□ -0.43
Sdc4O35988 Gm12615-201ENSMUST00000177970 382 ntBASIC12.34□□□□□ -0.43
Sdc4O35988 Gm12622-201ENSMUST00000177975 382 ntBASIC12.34□□□□□ -0.43
Sdc4O35988 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Sdc4O35988 Gm12627-201ENSMUST00000178412 382 ntBASIC12.34□□□□□ -0.43
Sdc4O35988 Gm12625-201ENSMUST00000179122 382 ntBASIC12.34□□□□□ -0.43
Sdc4O35988 Gm12614-201ENSMUST00000179586 382 ntBASIC12.34□□□□□ -0.43
Sdc4O35988 Gm12613-201ENSMUST00000180323 382 ntBASIC12.34□□□□□ -0.43
Sdc4O35988 Gm9211-201ENSMUST00000182882 975 ntBASIC12.34□□□□□ -0.43
Sdc4O35988 Gm37246-201ENSMUST00000192665 835 ntBASIC12.34□□□□□ -0.43
Sdc4O35988 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.34□□□□□ -0.43
Sdc4O35988 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.34□□□□□ -0.43
Sdc4O35988 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.34□□□□□ -0.43
Sdc4O35988 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc4O35988 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc4O35988 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc4O35988 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.34□□□□□ -0.43
Sdc4O35988 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.34□□□□□ -0.43
Sdc4O35988 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc4O35988 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc4O35988 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc4O35988 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc4O35988 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc4O35988 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc4O35988 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Sdc4O35988 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Sdc4O35988 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sdc4O35988 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sdc4O35988 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sdc4O35988 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Sdc4O35988 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Sdc4O35988 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc4O35988 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc4O35988 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc4O35988 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc4O35988 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sdc4O35988 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc4O35988 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.33□□□□□ -0.44
Sdc4O35988 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc4O35988 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sdc4O35988 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sdc4O35988 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.33□□□□□ -0.44
Sdc4O35988 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Sdc4O35988 Gm13461-201ENSMUST00000120980 662 ntBASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms