Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.73□□□□□ -0.53
Npc1O35604 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Npc1O35604 Gm5616-201ENSMUST00000165252 384 ntBASIC11.73□□□□□ -0.53
Npc1O35604 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Npc1O35604 Gm8741-201ENSMUST00000174736 384 ntBASIC11.73□□□□□ -0.53
Npc1O35604 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.73□□□□□ -0.53
Npc1O35604 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Npc1O35604 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Npc1O35604 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.73□□□□□ -0.53
Npc1O35604 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.73□□□□□ -0.53
Npc1O35604 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.73□□□□□ -0.53
Npc1O35604 Gm45224-201ENSMUST00000208203 414 ntBASIC11.73□□□□□ -0.53
Npc1O35604 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Npc1O35604 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Npc1O35604 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.73□□□□□ -0.53
Npc1O35604 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.73□□□□□ -0.53
Npc1O35604 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.73□□□□□ -0.53
Npc1O35604 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Npc1O35604 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Npc1O35604 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Npc1O35604 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Npc1O35604 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Npc1O35604 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Npc1O35604 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Npc1O35604 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Npc1O35604 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Npc1O35604 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Npc1O35604 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Npc1O35604 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Npc1O35604 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Npc1O35604 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Npc1O35604 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Npc1O35604 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Npc1O35604 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Npc1O35604 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Npc1O35604 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.72□□□□□ -0.53
Npc1O35604 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.72□□□□□ -0.53
Npc1O35604 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Npc1O35604 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Npc1O35604 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Npc1O35604 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Npc1O35604 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Npc1O35604 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Npc1O35604 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Npc1O35604 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.72□□□□□ -0.53
Npc1O35604 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.72□□□□□ -0.53
Npc1O35604 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Npc1O35604 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Npc1O35604 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Npc1O35604 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Npc1O35604 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Npc1O35604 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.72□□□□□ -0.53
Npc1O35604 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.72□□□□□ -0.53
Npc1O35604 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Npc1O35604 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Npc1O35604 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Npc1O35604 Gm11511-201ENSMUST00000118146 540 ntBASIC11.72□□□□□ -0.53
Npc1O35604 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Npc1O35604 Gm24749-201ENSMUST00000157838 343 ntBASIC11.72□□□□□ -0.53
Npc1O35604 Rprl1-201ENSMUST00000158050 327 ntBASIC11.72□□□□□ -0.53
Npc1O35604 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.72□□□□□ -0.53
Npc1O35604 Gm16505-201ENSMUST00000179981 232 ntBASIC11.72□□□□□ -0.53
Npc1O35604 Gm27341-201ENSMUST00000183570 106 ntBASIC11.72□□□□□ -0.53
Npc1O35604 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Npc1O35604 Gm28071-201ENSMUST00000190355 478 ntBASIC11.72□□□□□ -0.53
Npc1O35604 Gm18038-201ENSMUST00000197900 485 ntBASIC11.72□□□□□ -0.53
Npc1O35604 Gm35960-201ENSMUST00000202712 767 ntBASIC11.72□□□□□ -0.53
Npc1O35604 Rps4l-202ENSMUST00000204242 789 ntBASIC11.72□□□□□ -0.53
Npc1O35604 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Npc1O35604 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.72□□□□□ -0.53
Npc1O35604 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Npc1O35604 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.72□□□□□ -0.53
Npc1O35604 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Npc1O35604 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.72□□□□□ -0.53
Npc1O35604 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Npc1O35604 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Npc1O35604 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Npc1O35604 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.72□□□□□ -0.53
Npc1O35604 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Npc1O35604 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Npc1O35604 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Npc1O35604 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Npc1O35604 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Npc1O35604 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Npc1O35604 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Npc1O35604 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Npc1O35604 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Npc1O35604 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Npc1O35604 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Npc1O35604 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Npc1O35604 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Npc1O35604 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Npc1O35604 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Npc1O35604 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Npc1O35604 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Npc1O35604 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Npc1O35604 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Npc1O35604 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Npc1O35604 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.71□□□□□ -0.53
Npc1O35604 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms