Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.5□□□□□ -0.41
Ebf3O08791 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Ebf3O08791 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.49□□□□□ -0.41
Ebf3O08791 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.49□□□□□ -0.41
Ebf3O08791 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.49□□□□□ -0.41
Ebf3O08791 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.49□□□□□ -0.41
Ebf3O08791 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ebf3O08791 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ebf3O08791 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Ebf3O08791 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 Gm11941-201ENSMUST00000119904 610 ntBASIC12.49□□□□□ -0.41
Ebf3O08791 Gm14665-201ENSMUST00000122294 557 ntBASIC12.49□□□□□ -0.41
Ebf3O08791 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.49□□□□□ -0.41
Ebf3O08791 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.49□□□□□ -0.41
Ebf3O08791 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.49□□□□□ -0.41
Ebf3O08791 Gm44545-201ENSMUST00000208262 746 ntBASIC12.49□□□□□ -0.41
Ebf3O08791 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.49□□□□□ -0.41
Ebf3O08791 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 Gm26448-201ENSMUST00000082446 203 ntBASIC12.49□□□□□ -0.41
Ebf3O08791 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.49□□□□□ -0.41
Ebf3O08791 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Ebf3O08791 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf3O08791 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ebf3O08791 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.48□□□□□ -0.41
Ebf3O08791 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf3O08791 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf3O08791 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.48□□□□□ -0.41
Ebf3O08791 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf3O08791 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf3O08791 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf3O08791 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Ebf3O08791 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.48□□□□□ -0.41
Ebf3O08791 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf3O08791 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf3O08791 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf3O08791 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf3O08791 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf3O08791 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.48□□□□□ -0.41
Ebf3O08791 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf3O08791 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf3O08791 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ebf3O08791 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ebf3O08791 Gm7851-201ENSMUST00000117574 323 ntBASIC12.48□□□□□ -0.41
Ebf3O08791 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf3O08791 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.48□□□□□ -0.41
Ebf3O08791 Gm15782-201ENSMUST00000121073 445 ntBASIC12.48□□□□□ -0.41
Ebf3O08791 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.48□□□□□ -0.41
Ebf3O08791 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.48□□□□□ -0.41
Ebf3O08791 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.48□□□□□ -0.41
Ebf3O08791 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.48□□□□□ -0.41
Ebf3O08791 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf3O08791 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf3O08791 Gm27438-201ENSMUST00000183480 110 ntBASIC12.48□□□□□ -0.41
Ebf3O08791 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ebf3O08791 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.48□□□□□ -0.41
Ebf3O08791 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.48□□□□□ -0.41
Ebf3O08791 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf3O08791 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.48□□□□□ -0.41
Ebf3O08791 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.48□□□□□ -0.41
Ebf3O08791 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.48□□□□□ -0.41
Ebf3O08791 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf3O08791 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf3O08791 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf3O08791 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Ebf3O08791 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf3O08791 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Ebf3O08791 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms