Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Gm18801-201ENSMUST00000186616 536 ntBASIC12.26□□□□□ -0.45
AlyrefO08583 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC12.26□□□□□ -0.45
AlyrefO08583 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.26□□□□□ -0.45
AlyrefO08583 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.26□□□□□ -0.45
AlyrefO08583 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
AlyrefO08583 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
AlyrefO08583 Gm26448-201ENSMUST00000082446 203 ntBASIC12.26□□□□□ -0.45
AlyrefO08583 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC12.26□□□□□ -0.45
AlyrefO08583 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AlyrefO08583 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
AlyrefO08583 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AlyrefO08583 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.26□□□□□ -0.45
AlyrefO08583 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
AlyrefO08583 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AlyrefO08583 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AlyrefO08583 Gm42535-201ENSMUST00000197312 1399 ntBASIC12.26□□□□□ -0.45
AlyrefO08583 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
AlyrefO08583 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AlyrefO08583 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.26□□□□□ -0.45
AlyrefO08583 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AlyrefO08583 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AlyrefO08583 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
AlyrefO08583 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
AlyrefO08583 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
AlyrefO08583 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
AlyrefO08583 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
AlyrefO08583 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
AlyrefO08583 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC12.25□□□□□ -0.45
AlyrefO08583 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
AlyrefO08583 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
AlyrefO08583 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.25□□□□□ -0.45
AlyrefO08583 Gm11978-201ENSMUST00000122315 466 ntBASIC12.25□□□□□ -0.45
AlyrefO08583 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 Gm8723-201ENSMUST00000166076 820 ntBASIC12.25□□□□□ -0.45
AlyrefO08583 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.25□□□□□ -0.45
AlyrefO08583 Gm8701-201ENSMUST00000169259 874 ntBASIC12.25□□□□□ -0.45
AlyrefO08583 Gm23045-201ENSMUST00000175041 96 ntBASIC12.25□□□□□ -0.45
AlyrefO08583 Gm43186-201ENSMUST00000198130 824 ntBASIC12.25□□□□□ -0.45
AlyrefO08583 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.25□□□□□ -0.45
AlyrefO08583 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 Gm6304-201ENSMUST00000096579 447 ntBASIC12.25□□□□□ -0.45
AlyrefO08583 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
AlyrefO08583 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
AlyrefO08583 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
AlyrefO08583 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.25□□□□□ -0.45
AlyrefO08583 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
AlyrefO08583 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.25□□□□□ -0.45
AlyrefO08583 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
AlyrefO08583 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
AlyrefO08583 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.24□□□□□ -0.45
AlyrefO08583 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.24□□□□□ -0.45
AlyrefO08583 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
AlyrefO08583 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.24□□□□□ -0.45
AlyrefO08583 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.24□□□□□ -0.45
AlyrefO08583 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.24□□□□□ -0.45
AlyrefO08583 Rprl1-201ENSMUST00000158050 327 ntBASIC12.24□□□□□ -0.45
AlyrefO08583 Gm17214-201ENSMUST00000164501 541 ntBASIC12.24□□□□□ -0.45
AlyrefO08583 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.24□□□□□ -0.45
AlyrefO08583 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
AlyrefO08583 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.24□□□□□ -0.45
AlyrefO08583 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms