Protein–RNA interactions for Protein: J3QP37

Smim22, MCG1038270, isoform CRA_a, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim22J3QP37 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim22J3QP37 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim22J3QP37 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim22J3QP37 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim22J3QP37 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Smim22J3QP37 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim22J3QP37 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Smim22J3QP37 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.12□□□□□ -0.47
Smim22J3QP37 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Smim22J3QP37 Gm25562-201ENSMUST00000104608 133 ntBASIC12.12□□□□□ -0.47
Smim22J3QP37 Gm11540-201ENSMUST00000117457 780 ntBASIC12.12□□□□□ -0.47
Smim22J3QP37 Gm15625-201ENSMUST00000117617 1093 ntBASIC12.12□□□□□ -0.47
Smim22J3QP37 Gm13117-201ENSMUST00000120894 691 ntBASIC12.12□□□□□ -0.47
Smim22J3QP37 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Smim22J3QP37 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Gm25735-201ENSMUST00000175164 215 ntBASIC12.12□□□□□ -0.47
Smim22J3QP37 Mir8093-201ENSMUST00000185043 137 ntBASIC12.12□□□□□ -0.47
Smim22J3QP37 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC12.12□□□□□ -0.47
Smim22J3QP37 Ints5-203ENSMUST00000191089 568 ntTSL 5 BASIC12.12□□□□□ -0.47
Smim22J3QP37 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.12□□□□□ -0.47
Smim22J3QP37 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Smim22J3QP37 AC161374.2-201ENSMUST00000223662 596 ntBASIC12.12□□□□□ -0.47
Smim22J3QP37 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.12□□□□□ -0.47
Smim22J3QP37 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Smim22J3QP37 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.12□□□□□ -0.47
Smim22J3QP37 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.12□□□□□ -0.47
Smim22J3QP37 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.12□□□□□ -0.47
Smim22J3QP37 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Smim22J3QP37 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.12□□□□□ -0.47
Smim22J3QP37 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim22J3QP37 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim22J3QP37 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim22J3QP37 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim22J3QP37 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smim22J3QP37 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Smim22J3QP37 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim22J3QP37 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim22J3QP37 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Smim22J3QP37 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim22J3QP37 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim22J3QP37 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim22J3QP37 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smim22J3QP37 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim22J3QP37 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim22J3QP37 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim22J3QP37 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.11□□□□□ -0.47
Smim22J3QP37 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.11□□□□□ -0.47
Smim22J3QP37 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim22J3QP37 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.11□□□□□ -0.47
Smim22J3QP37 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim22J3QP37 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Smim22J3QP37 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Smim22J3QP37 Gm11191-201ENSMUST00000117231 610 ntBASIC12.11□□□□□ -0.47
Smim22J3QP37 Gm15136-201ENSMUST00000120552 533 ntBASIC12.11□□□□□ -0.47
Smim22J3QP37 Gm15595-201ENSMUST00000120840 961 ntBASIC12.11□□□□□ -0.47
Smim22J3QP37 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Smim22J3QP37 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smim22J3QP37 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smim22J3QP37 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smim22J3QP37 Gm22379-201ENSMUST00000157480 131 ntBASIC12.11□□□□□ -0.47
Smim22J3QP37 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC12.11□□□□□ -0.47
Smim22J3QP37 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Smim22J3QP37 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC12.11□□□□□ -0.47
Smim22J3QP37 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Smim22J3QP37 Gm37436-201ENSMUST00000193842 1085 ntBASIC12.11□□□□□ -0.47
Smim22J3QP37 Gm7939-201ENSMUST00000201233 1050 ntBASIC12.11□□□□□ -0.47
Smim22J3QP37 BC080696-201ENSMUST00000202858 1218 ntBASIC12.11□□□□□ -0.47
Smim22J3QP37 Gm30055-201ENSMUST00000203175 803 ntBASIC12.11□□□□□ -0.47
Smim22J3QP37 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms