Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Gm13047-201ENSMUST00000117116 815 ntBASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Gm13117-201ENSMUST00000120894 691 ntBASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Gm13022-201ENSMUST00000121181 285 ntBASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Gm12030-201ENSMUST00000121917 223 ntBASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Ighv2-1-201ENSMUST00000170946 353 ntBASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Gm7741-201ENSMUST00000181445 989 ntBASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 CT573047.1-201ENSMUST00000223652 851 ntBASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 CT030653.1-201ENSMUST00000224382 1279 ntBASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 AC129308.3-201ENSMUST00000225652 524 ntBASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
B020004C17RikJ3QP07 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Gm12969-201ENSMUST00000120199 1004 ntBASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Gm37826-201ENSMUST00000195329 322 ntBASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 AC168279.1-201ENSMUST00000214611 382 ntBASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Gm8325-201ENSMUST00000099086 453 ntBASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
B020004C17RikJ3QP07 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
B020004C17RikJ3QP07 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
B020004C17RikJ3QP07 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
B020004C17RikJ3QP07 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
B020004C17RikJ3QP07 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
B020004C17RikJ3QP07 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
B020004C17RikJ3QP07 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
B020004C17RikJ3QP07 Gm13549-201ENSMUST00000118339 796 ntBASIC13.34□□□□□ -0.27
B020004C17RikJ3QP07 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC13.34□□□□□ -0.27
B020004C17RikJ3QP07 Gm12274-201ENSMUST00000120062 385 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms