Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 Gm12218-201ENSMUST00000117666 399 ntBASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 Gm11500-201ENSMUST00000118237 601 ntBASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 Gm13117-201ENSMUST00000120894 691 ntBASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 Gm18706-201ENSMUST00000210053 1066 ntBASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 Gm18065-201ENSMUST00000221395 526 ntBASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 Ap3s1-202ENSMUST00000224622 978 ntBASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcf11G3X9Z4 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcf11G3X9Z4 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcf11G3X9Z4 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcf11G3X9Z4 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcf11G3X9Z4 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcf11G3X9Z4 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcf11G3X9Z4 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcf11G3X9Z4 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcf11G3X9Z4 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcf11G3X9Z4 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcf11G3X9Z4 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Pcf11G3X9Z4 Gm12179-201ENSMUST00000118344 1272 ntBASIC17.86■□□□□ 0.45
Pcf11G3X9Z4 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC17.86■□□□□ 0.45
Pcf11G3X9Z4 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC17.86■□□□□ 0.45
Pcf11G3X9Z4 Gm43912-201ENSMUST00000204352 538 ntBASIC17.86■□□□□ 0.45
Pcf11G3X9Z4 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC17.86■□□□□ 0.45
Pcf11G3X9Z4 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Pcf11G3X9Z4 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Pcf11G3X9Z4 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcf11G3X9Z4 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC17.86■□□□□ 0.45
Pcf11G3X9Z4 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcf11G3X9Z4 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC17.86■□□□□ 0.45
Pcf11G3X9Z4 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcf11G3X9Z4 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcf11G3X9Z4 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcf11G3X9Z4 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcf11G3X9Z4 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcf11G3X9Z4 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcf11G3X9Z4 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcf11G3X9Z4 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcf11G3X9Z4 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC17.85■□□□□ 0.45
Pcf11G3X9Z4 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcf11G3X9Z4 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcf11G3X9Z4 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcf11G3X9Z4 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcf11G3X9Z4 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcf11G3X9Z4 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC17.85■□□□□ 0.45
Pcf11G3X9Z4 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Pcf11G3X9Z4 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcf11G3X9Z4 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcf11G3X9Z4 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcf11G3X9Z4 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcf11G3X9Z4 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcf11G3X9Z4 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Pcf11G3X9Z4 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcf11G3X9Z4 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcf11G3X9Z4 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcf11G3X9Z4 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcf11G3X9Z4 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcf11G3X9Z4 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Pcf11G3X9Z4 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Pcf11G3X9Z4 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcf11G3X9Z4 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcf11G3X9Z4 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcf11G3X9Z4 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcf11G3X9Z4 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcf11G3X9Z4 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Pcf11G3X9Z4 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcf11G3X9Z4 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcf11G3X9Z4 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Pcf11G3X9Z4 Gm14807-201ENSMUST00000116640 983 ntBASIC17.84■□□□□ 0.45
Pcf11G3X9Z4 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcf11G3X9Z4 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcf11G3X9Z4 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC17.84■□□□□ 0.45
Pcf11G3X9Z4 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcf11G3X9Z4 Gm8723-201ENSMUST00000166076 820 ntBASIC17.84■□□□□ 0.45
Pcf11G3X9Z4 Gm8701-201ENSMUST00000169259 874 ntBASIC17.84■□□□□ 0.45
Pcf11G3X9Z4 Gm9116-201ENSMUST00000192400 1018 ntBASIC17.84■□□□□ 0.45
Pcf11G3X9Z4 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC17.84■□□□□ 0.45
Pcf11G3X9Z4 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms