Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.47□□□□□ -0.09
NpcdF8VQB8 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NpcdF8VQB8 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NpcdF8VQB8 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NpcdF8VQB8 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.46□□□□□ -0.09
NpcdF8VQB8 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NpcdF8VQB8 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NpcdF8VQB8 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NpcdF8VQB8 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NpcdF8VQB8 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NpcdF8VQB8 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NpcdF8VQB8 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NpcdF8VQB8 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NpcdF8VQB8 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
NpcdF8VQB8 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
NpcdF8VQB8 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
NpcdF8VQB8 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC14.46□□□□□ -0.09
NpcdF8VQB8 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NpcdF8VQB8 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NpcdF8VQB8 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.46□□□□□ -0.09
NpcdF8VQB8 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC14.46□□□□□ -0.09
NpcdF8VQB8 Gm26989-201ENSMUST00000182608 749 ntBASIC14.46□□□□□ -0.09
NpcdF8VQB8 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC14.46□□□□□ -0.09
NpcdF8VQB8 Gm5714-201ENSMUST00000197343 566 ntBASIC14.46□□□□□ -0.09
NpcdF8VQB8 Gm43852-201ENSMUST00000202098 917 ntBASIC14.46□□□□□ -0.09
NpcdF8VQB8 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NpcdF8VQB8 Gm44506-201ENSMUST00000206278 965 ntBASIC14.46□□□□□ -0.09
NpcdF8VQB8 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC14.46□□□□□ -0.09
NpcdF8VQB8 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NpcdF8VQB8 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NpcdF8VQB8 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NpcdF8VQB8 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NpcdF8VQB8 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
NpcdF8VQB8 Gm13910-201ENSMUST00000121752 1428 ntBASIC14.46□□□□□ -0.09
NpcdF8VQB8 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC14.46□□□□□ -0.09
NpcdF8VQB8 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NpcdF8VQB8 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NpcdF8VQB8 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
NpcdF8VQB8 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NpcdF8VQB8 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.45□□□□□ -0.1
NpcdF8VQB8 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NpcdF8VQB8 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NpcdF8VQB8 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
NpcdF8VQB8 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NpcdF8VQB8 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NpcdF8VQB8 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NpcdF8VQB8 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.45□□□□□ -0.1
NpcdF8VQB8 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NpcdF8VQB8 Gm25766-201ENSMUST00000104101 131 ntBASIC14.45□□□□□ -0.1
NpcdF8VQB8 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NpcdF8VQB8 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NpcdF8VQB8 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NpcdF8VQB8 Gm11660-201ENSMUST00000120955 412 ntBASIC14.45□□□□□ -0.1
NpcdF8VQB8 Gm25604-201ENSMUST00000158359 133 ntBASIC14.45□□□□□ -0.1
NpcdF8VQB8 Mir6407-201ENSMUST00000184510 101 ntBASIC14.45□□□□□ -0.1
NpcdF8VQB8 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC14.45□□□□□ -0.1
NpcdF8VQB8 Gm18711-201ENSMUST00000199341 750 ntBASIC14.45□□□□□ -0.1
NpcdF8VQB8 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NpcdF8VQB8 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC14.45□□□□□ -0.1
NpcdF8VQB8 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NpcdF8VQB8 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
NpcdF8VQB8 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
NpcdF8VQB8 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NpcdF8VQB8 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NpcdF8VQB8 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NpcdF8VQB8 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NpcdF8VQB8 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NpcdF8VQB8 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NpcdF8VQB8 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.45□□□□□ -0.1
NpcdF8VQB8 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.45□□□□□ -0.1
NpcdF8VQB8 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC14.45□□□□□ -0.1
NpcdF8VQB8 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NpcdF8VQB8 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NpcdF8VQB8 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.44□□□□□ -0.1
NpcdF8VQB8 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
NpcdF8VQB8 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NpcdF8VQB8 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NpcdF8VQB8 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NpcdF8VQB8 Gm43334-201ENSMUST00000197740 1318 ntBASIC14.44□□□□□ -0.1
NpcdF8VQB8 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NpcdF8VQB8 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NpcdF8VQB8 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NpcdF8VQB8 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NpcdF8VQB8 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NpcdF8VQB8 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NpcdF8VQB8 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.44□□□□□ -0.1
NpcdF8VQB8 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NpcdF8VQB8 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC14.44□□□□□ -0.1
NpcdF8VQB8 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NpcdF8VQB8 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NpcdF8VQB8 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NpcdF8VQB8 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NpcdF8VQB8 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms