Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.36□□□□□ -0.11
Ube4aE9Q735 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Gm25076-201ENSMUST00000104098 132 ntBASIC14.36□□□□□ -0.11
Ube4aE9Q735 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC14.36□□□□□ -0.11
Ube4aE9Q735 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Gm26047-201ENSMUST00000157308 113 ntBASIC14.36□□□□□ -0.11
Ube4aE9Q735 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Ube4aE9Q735 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC14.36□□□□□ -0.11
Ube4aE9Q735 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Gm44329-201ENSMUST00000197469 112 ntBASIC14.36□□□□□ -0.11
Ube4aE9Q735 Gm26047-202ENSMUST00000198840 115 ntBASIC14.36□□□□□ -0.11
Ube4aE9Q735 Gm42599-201ENSMUST00000201308 469 ntBASIC14.36□□□□□ -0.11
Ube4aE9Q735 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Gm13384-201ENSMUST00000117166 1344 ntBASIC14.36□□□□□ -0.11
Ube4aE9Q735 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Gm45199-201ENSMUST00000207640 1507 ntBASIC14.36□□□□□ -0.11
Ube4aE9Q735 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube4aE9Q735 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.35□□□□□ -0.11
Ube4aE9Q735 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ube4aE9Q735 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4aE9Q735 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Gm1840-201ENSMUST00000051687 1432 ntBASIC14.35□□□□□ -0.11
Ube4aE9Q735 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC14.35□□□□□ -0.11
Ube4aE9Q735 Gm5982-201ENSMUST00000196234 512 ntBASIC14.35□□□□□ -0.11
Ube4aE9Q735 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC14.35□□□□□ -0.11
Ube4aE9Q735 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4aE9Q735 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ube4aE9Q735 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Rubie-203ENSMUST00000227803 2430 ntBASIC14.35□□□□□ -0.11
Ube4aE9Q735 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube4aE9Q735 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Ube4aE9Q735 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4aE9Q735 AC166836.1-201ENSMUST00000219933 1795 ntBASIC14.34□□□□□ -0.11
Ube4aE9Q735 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4aE9Q735 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.34□□□□□ -0.11
Ube4aE9Q735 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4aE9Q735 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4aE9Q735 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4aE9Q735 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4aE9Q735 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4aE9Q735 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4aE9Q735 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4aE9Q735 Gm23153-201ENSMUST00000175323 313 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms