Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Gm15004-201ENSMUST00000119192 630 ntBASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Gm14441-201ENSMUST00000121960 540 ntBASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cpsf4lE9Q2N0 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Cpsf4lE9Q2N0 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms