Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Gm23085-201ENSMUST00000157849 293 ntBASIC12.89□□□□□ -0.35
Clca3bE9PUL3 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Gm6867-201ENSMUST00000219165 425 ntBASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clca3bE9PUL3 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Gm45575-201ENSMUST00000210283 548 ntBASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.88□□□□□ -0.35
Clca3bE9PUL3 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clca3bE9PUL3 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clca3bE9PUL3 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clca3bE9PUL3 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clca3bE9PUL3 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clca3bE9PUL3 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clca3bE9PUL3 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clca3bE9PUL3 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clca3bE9PUL3 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Clca3bE9PUL3 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.87□□□□□ -0.35
Clca3bE9PUL3 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clca3bE9PUL3 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clca3bE9PUL3 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clca3bE9PUL3 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clca3bE9PUL3 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clca3bE9PUL3 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clca3bE9PUL3 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms