Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 Gm2594-201ENSMUST00000214774 742 ntBASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 Kcnk16-202ENSMUST00000225596 2127 ntBASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hfm1D3Z4R1 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Hfm1D3Z4R1 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Hfm1D3Z4R1 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hfm1D3Z4R1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Hfm1D3Z4R1 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hfm1D3Z4R1 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hfm1D3Z4R1 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Hfm1D3Z4R1 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hfm1D3Z4R1 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Hfm1D3Z4R1 Gm11996-201ENSMUST00000117538 915 ntBASIC16.58■□□□□ 0.24
Hfm1D3Z4R1 Gm15196-201ENSMUST00000121406 482 ntBASIC16.58■□□□□ 0.24
Hfm1D3Z4R1 Gm15329-201ENSMUST00000121408 155 ntBASIC16.58■□□□□ 0.24
Hfm1D3Z4R1 Gm13981-201ENSMUST00000122360 447 ntBASIC16.58■□□□□ 0.24
Hfm1D3Z4R1 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC16.58■□□□□ 0.24
Hfm1D3Z4R1 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hfm1D3Z4R1 Gm25226-201ENSMUST00000158198 123 ntBASIC16.58■□□□□ 0.24
Hfm1D3Z4R1 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hfm1D3Z4R1 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Hfm1D3Z4R1 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Hfm1D3Z4R1 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC16.58■□□□□ 0.24
Hfm1D3Z4R1 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Hfm1D3Z4R1 Gm5599-201ENSMUST00000209602 788 ntBASIC16.58■□□□□ 0.24
Hfm1D3Z4R1 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Hfm1D3Z4R1 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hfm1D3Z4R1 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Hfm1D3Z4R1 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hfm1D3Z4R1 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Hfm1D3Z4R1 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hfm1D3Z4R1 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hfm1D3Z4R1 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hfm1D3Z4R1 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hfm1D3Z4R1 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Hfm1D3Z4R1 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hfm1D3Z4R1 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hfm1D3Z4R1 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hfm1D3Z4R1 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hfm1D3Z4R1 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hfm1D3Z4R1 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Hfm1D3Z4R1 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Hfm1D3Z4R1 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hfm1D3Z4R1 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hfm1D3Z4R1 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC16.57■□□□□ 0.24
Hfm1D3Z4R1 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hfm1D3Z4R1 Olfr692-202ENSMUST00000217827 1126 ntBASIC16.57■□□□□ 0.24
Hfm1D3Z4R1 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hfm1D3Z4R1 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Hfm1D3Z4R1 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Hfm1D3Z4R1 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hfm1D3Z4R1 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hfm1D3Z4R1 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hfm1D3Z4R1 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hfm1D3Z4R1 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hfm1D3Z4R1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hfm1D3Z4R1 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hfm1D3Z4R1 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
Hfm1D3Z4R1 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hfm1D3Z4R1 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hfm1D3Z4R1 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hfm1D3Z4R1 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hfm1D3Z4R1 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hfm1D3Z4R1 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hfm1D3Z4R1 Acot6-202ENSMUST00000222921 3622 ntBASIC16.56■□□□□ 0.24
Hfm1D3Z4R1 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hfm1D3Z4R1 Gm25562-201ENSMUST00000104608 133 ntBASIC16.56■□□□□ 0.24
Hfm1D3Z4R1 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hfm1D3Z4R1 Gm15197-201ENSMUST00000120526 478 ntBASIC16.56■□□□□ 0.24
Hfm1D3Z4R1 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC16.56■□□□□ 0.24
Hfm1D3Z4R1 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
Hfm1D3Z4R1 Gm9369-201ENSMUST00000196009 733 ntBASIC16.56■□□□□ 0.24
Hfm1D3Z4R1 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hfm1D3Z4R1 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hfm1D3Z4R1 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hfm1D3Z4R1 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hfm1D3Z4R1 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hfm1D3Z4R1 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hfm1D3Z4R1 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hfm1D3Z4R1 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hfm1D3Z4R1 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hfm1D3Z4R1 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hfm1D3Z4R1 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hfm1D3Z4R1 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC16.56■□□□□ 0.24
Hfm1D3Z4R1 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hfm1D3Z4R1 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hfm1D3Z4R1 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hfm1D3Z4R1 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hfm1D3Z4R1 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms