Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 Gm14165-201ENSMUST00000121456 952 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 Gm6970-201ENSMUST00000169692 666 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 Gm23647-201ENSMUST00000175042 109 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 Rn5s-201ENSMUST00000177555 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 n-R5s108-201ENSMUST00000177575 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 n-R5s121-201ENSMUST00000177589 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 n-R5s146-201ENSMUST00000177889 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 Gm22109-201ENSMUST00000177995 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 Gm22291-201ENSMUST00000178027 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 n-R5s141-201ENSMUST00000178066 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 Gm23284-201ENSMUST00000178069 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 n-R5s100-201ENSMUST00000178106 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 n-R5s111-201ENSMUST00000178203 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 n-R5s105-201ENSMUST00000178499 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 n-R5s149-201ENSMUST00000178520 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 n-R5s103-201ENSMUST00000178755 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 n-R5s123-201ENSMUST00000178804 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 n-R5s142-201ENSMUST00000178820 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 n-R5s144-201ENSMUST00000178859 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 n-R5s139-201ENSMUST00000178975 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 n-R5s134-201ENSMUST00000178983 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 n-R5s136-201ENSMUST00000179080 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 Gm25018-201ENSMUST00000179081 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 n-R5s104-201ENSMUST00000179107 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 n-R5s113-201ENSMUST00000179143 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 n-R5s133-201ENSMUST00000179275 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 n-R5s117-201ENSMUST00000179431 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 Gm25212-201ENSMUST00000179432 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 n-R5s138-201ENSMUST00000179476 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 n-R5s122-201ENSMUST00000179500 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 n-R5s143-201ENSMUST00000179542 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 n-R5s107-201ENSMUST00000179704 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 Gm26391-201ENSMUST00000179843 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 n-R5s110-201ENSMUST00000179995 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 n-R5s128-201ENSMUST00000180096 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 n-R5s124-201ENSMUST00000180334 119 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 Gm24089-201ENSMUST00000093696 109 ntBASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC3.4□□□□□ -1.86
Hmcn1D3YXG0 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Gm15459-201ENSMUST00000117405 1941 ntBASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Gm8355-201ENSMUST00000177767 1941 ntBASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Gm5740-201ENSMUST00000211003 1857 ntBASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Gm15720-201ENSMUST00000117133 282 ntBASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Gm25319-201ENSMUST00000122552 325 ntBASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Mir6396-201ENSMUST00000183603 111 ntBASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Gm28462-201ENSMUST00000185217 374 ntTSL 5 BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Gm28406-201ENSMUST00000186516 397 ntTSL 5 BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Gm28746-201ENSMUST00000187453 380 ntBASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Gm28348-201ENSMUST00000187833 397 ntTSL 5 BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Gm29404-201ENSMUST00000187914 397 ntTSL 5 BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Gm28313-201ENSMUST00000191411 397 ntTSL 5 BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Gm35670-201ENSMUST00000192493 397 ntTSL 5 BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Gm37656-201ENSMUST00000192673 397 ntTSL 5 BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Gm37561-201ENSMUST00000195221 368 ntTSL 5 BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 AC132881.1-201ENSMUST00000223780 1062 ntBASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 AC163638.2-201ENSMUST00000224920 827 ntBASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 AC159196.1-201ENSMUST00000225524 377 ntBASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 AC116596.1-201ENSMUST00000228112 1762 ntBASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Hmcn1D3YXG0 Gm31182-201ENSMUST00000219061 2391 ntTSL 5 BASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms