Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Mir181d-201ENSMUST00000102383 72 ntBASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Gm9916-201ENSMUST00000192943 1228 ntBASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Gm44216-201ENSMUST00000203942 157 ntBASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Col4a6B1AVK5 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.47
Col4a6B1AVK5 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Col4a6B1AVK5 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Col4a6B1AVK5 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Gm14234-201ENSMUST00000119539 845 ntBASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Gm29763-201ENSMUST00000205306 616 ntBASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a6B1AVK5 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Gm13422-201ENSMUST00000118834 504 ntBASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Gm14497-201ENSMUST00000119537 580 ntBASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a6B1AVK5 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 119.7 ms