Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc112A0AUP1 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Gm2128-201ENSMUST00000108009 2560 ntBASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Gm11531-201ENSMUST00000117614 555 ntBASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Gm13829-201ENSMUST00000119600 138 ntBASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Mir1982-201ENSMUST00000157368 74 ntBASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Snora78-201ENSMUST00000158630 128 ntBASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc112A0AUP1 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Gm26684-202ENSMUST00000228229 8257 ntBASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Gm5187-201ENSMUST00000117317 991 ntBASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Gm11425-201ENSMUST00000119608 498 ntBASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Gm12164-201ENSMUST00000121695 551 ntBASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Gm14441-201ENSMUST00000121960 540 ntBASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Gm19309-201ENSMUST00000218295 205 ntBASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Gm9396-201ENSMUST00000076703 567 ntBASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc112A0AUP1 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc112A0AUP1 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms