Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm13937-201ENSMUST00000121000 988 ntBASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Mir1956-201ENSMUST00000157748 65 ntBASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm12407-201ENSMUST00000180219 324 ntBASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.67□□□□□ -0.54
Gm28729A0A1B0GSW2 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm11451-201ENSMUST00000118946 630 ntBASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm11783-201ENSMUST00000119549 885 ntBASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm21092-201ENSMUST00000178995 955 ntBASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm9358-201ENSMUST00000183067 927 ntBASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm6450-201ENSMUST00000200896 574 ntBASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm44506-201ENSMUST00000206278 965 ntBASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Cog3-203ENSMUST00000227473 4197 ntBASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Gm28729A0A1B0GSW2 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms