Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm5850-201ENSMUST00000192923 1206 ntBASIC9.83□□□□□ -0.84
Trav18A0A075B656 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav18A0A075B656 AC140451.2-201ENSMUST00000228030 664 ntBASIC9.83□□□□□ -0.84
Trav18A0A075B656 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC9.83□□□□□ -0.84
Trav18A0A075B656 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav18A0A075B656 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Gm18626-201ENSMUST00000221512 1409 ntBASIC9.82□□□□□ -0.84
Trav18A0A075B656 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Gm43760-201ENSMUST00000202120 3015 ntBASIC9.82□□□□□ -0.84
Trav18A0A075B656 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Gm10434-201ENSMUST00000101158 471 ntBASIC9.82□□□□□ -0.84
Trav18A0A075B656 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Mir1247-201ENSMUST00000116706 82 ntBASIC9.82□□□□□ -0.84
Trav18A0A075B656 Gm11425-201ENSMUST00000119608 498 ntBASIC9.82□□□□□ -0.84
Trav18A0A075B656 Gm12329-201ENSMUST00000120829 1007 ntBASIC9.82□□□□□ -0.84
Trav18A0A075B656 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Gm24845-201ENSMUST00000158034 109 ntBASIC9.82□□□□□ -0.84
Trav18A0A075B656 Rprl1-201ENSMUST00000158050 327 ntBASIC9.82□□□□□ -0.84
Trav18A0A075B656 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Gm27514-201ENSMUST00000183692 110 ntBASIC9.82□□□□□ -0.84
Trav18A0A075B656 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Gm18711-201ENSMUST00000199341 750 ntBASIC9.82□□□□□ -0.84
Trav18A0A075B656 Gm17931-201ENSMUST00000208132 634 ntBASIC9.82□□□□□ -0.84
Trav18A0A075B656 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Gm9396-201ENSMUST00000076703 567 ntBASIC9.82□□□□□ -0.84
Trav18A0A075B656 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 AC154671.1-201ENSMUST00000228617 1578 ntBASIC9.82□□□□□ -0.84
Trav18A0A075B656 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Gm38194-201ENSMUST00000194529 2211 ntBASIC9.82□□□□□ -0.84
Trav18A0A075B656 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav18A0A075B656 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Trav18A0A075B656 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav18A0A075B656 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Trav18A0A075B656 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav18A0A075B656 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Trav18A0A075B656 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav18A0A075B656 Gm44152-201ENSMUST00000205007 1691 ntBASIC9.81□□□□□ -0.84
Trav18A0A075B656 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms