Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
H2afb2S4R1M3 Gm10399-202ENSMUST00000202768 748 ntBASIC20.69■□□□□ 0.9
H2afb2S4R1M3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
H2afb2S4R1M3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
H2afb2S4R1M3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
H2afb2S4R1M3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
H2afb2S4R1M3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
H2afb2S4R1M3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
H2afb2S4R1M3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
H2afb2S4R1M3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
H2afb2S4R1M3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
H2afb2S4R1M3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
H2afb2S4R1M3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
H2afb2S4R1M3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.68■□□□□ 0.9
H2afb2S4R1M3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.68■□□□□ 0.9
H2afb2S4R1M3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
H2afb2S4R1M3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
H2afb2S4R1M3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
H2afb2S4R1M3 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.67■□□□□ 0.9
H2afb2S4R1M3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.67■□□□□ 0.9
H2afb2S4R1M3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
H2afb2S4R1M3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.67■□□□□ 0.9
H2afb2S4R1M3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
H2afb2S4R1M3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
H2afb2S4R1M3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
H2afb2S4R1M3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
H2afb2S4R1M3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
H2afb2S4R1M3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
H2afb2S4R1M3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H2afb2S4R1M3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.66■□□□□ 0.9
H2afb2S4R1M3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
H2afb2S4R1M3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
H2afb2S4R1M3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H2afb2S4R1M3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.66■□□□□ 0.9
H2afb2S4R1M3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
H2afb2S4R1M3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb2S4R1M3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb2S4R1M3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.65■□□□□ 0.9
H2afb2S4R1M3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb2S4R1M3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb2S4R1M3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.65■□□□□ 0.9
H2afb2S4R1M3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
H2afb2S4R1M3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb2S4R1M3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
H2afb2S4R1M3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.64■□□□□ 0.9
H2afb2S4R1M3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
H2afb2S4R1M3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
H2afb2S4R1M3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
H2afb2S4R1M3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.9
H2afb2S4R1M3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
H2afb2S4R1M3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
H2afb2S4R1M3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.64■□□□□ 0.89
H2afb2S4R1M3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.64■□□□□ 0.89
H2afb2S4R1M3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
H2afb2S4R1M3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
H2afb2S4R1M3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
H2afb2S4R1M3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
H2afb2S4R1M3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H2afb2S4R1M3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.63■□□□□ 0.89
H2afb2S4R1M3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
H2afb2S4R1M3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.63■□□□□ 0.89
H2afb2S4R1M3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H2afb2S4R1M3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
H2afb2S4R1M3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H2afb2S4R1M3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
H2afb2S4R1M3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H2afb2S4R1M3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
H2afb2S4R1M3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
H2afb2S4R1M3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
H2afb2S4R1M3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
H2afb2S4R1M3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H2afb2S4R1M3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
H2afb2S4R1M3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
H2afb2S4R1M3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H2afb2S4R1M3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.62■□□□□ 0.89
H2afb2S4R1M3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
H2afb2S4R1M3 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.61■□□□□ 0.89
H2afb2S4R1M3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
H2afb2S4R1M3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
H2afb2S4R1M3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
H2afb2S4R1M3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
H2afb2S4R1M3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2afb2S4R1M3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2afb2S4R1M3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2afb2S4R1M3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2afb2S4R1M3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
H2afb2S4R1M3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
H2afb2S4R1M3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
H2afb2S4R1M3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
H2afb2S4R1M3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
H2afb2S4R1M3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
H2afb2S4R1M3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.59■□□□□ 0.89
H2afb2S4R1M3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.59■□□□□ 0.89
H2afb2S4R1M3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
H2afb2S4R1M3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
H2afb2S4R1M3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
H2afb2S4R1M3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
H2afb2S4R1M3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
H2afb2S4R1M3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
H2afb2S4R1M3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms