Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sec61a2Q9JLR1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Sec61a2Q9JLR1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sec61a2Q9JLR1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Sec61a2Q9JLR1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sec61a2Q9JLR1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sec61a2Q9JLR1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sec61a2Q9JLR1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Sec61a2Q9JLR1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sec61a2Q9JLR1 Gm15546-201ENSMUST00000122095 826 ntBASIC18.51■□□□□ 0.55
Sec61a2Q9JLR1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sec61a2Q9JLR1 Gm15820-201ENSMUST00000201566 728 ntBASIC18.51■□□□□ 0.55
Sec61a2Q9JLR1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sec61a2Q9JLR1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sec61a2Q9JLR1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sec61a2Q9JLR1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sec61a2Q9JLR1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sec61a2Q9JLR1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sec61a2Q9JLR1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Sec61a2Q9JLR1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sec61a2Q9JLR1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sec61a2Q9JLR1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sec61a2Q9JLR1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sec61a2Q9JLR1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Sec61a2Q9JLR1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Sec61a2Q9JLR1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Sec61a2Q9JLR1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sec61a2Q9JLR1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Sec61a2Q9JLR1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.49■□□□□ 0.55
Sec61a2Q9JLR1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Sec61a2Q9JLR1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Sec61a2Q9JLR1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.49■□□□□ 0.55
Sec61a2Q9JLR1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sec61a2Q9JLR1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Sec61a2Q9JLR1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sec61a2Q9JLR1 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.49■□□□□ 0.55
Sec61a2Q9JLR1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sec61a2Q9JLR1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sec61a2Q9JLR1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sec61a2Q9JLR1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sec61a2Q9JLR1 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.48■□□□□ 0.55
Sec61a2Q9JLR1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Sec61a2Q9JLR1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sec61a2Q9JLR1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sec61a2Q9JLR1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Sec61a2Q9JLR1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Sec61a2Q9JLR1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sec61a2Q9JLR1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sec61a2Q9JLR1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sec61a2Q9JLR1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sec61a2Q9JLR1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sec61a2Q9JLR1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sec61a2Q9JLR1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sec61a2Q9JLR1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Sec61a2Q9JLR1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Sec61a2Q9JLR1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sec61a2Q9JLR1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Sec61a2Q9JLR1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sec61a2Q9JLR1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Sec61a2Q9JLR1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sec61a2Q9JLR1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.46■□□□□ 0.55
Sec61a2Q9JLR1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sec61a2Q9JLR1 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.46■□□□□ 0.55
Sec61a2Q9JLR1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Sec61a2Q9JLR1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sec61a2Q9JLR1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sec61a2Q9JLR1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
Sec61a2Q9JLR1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
Sec61a2Q9JLR1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sec61a2Q9JLR1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sec61a2Q9JLR1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.45■□□□□ 0.54
Sec61a2Q9JLR1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Sec61a2Q9JLR1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sec61a2Q9JLR1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sec61a2Q9JLR1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sec61a2Q9JLR1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sec61a2Q9JLR1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sec61a2Q9JLR1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sec61a2Q9JLR1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sec61a2Q9JLR1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sec61a2Q9JLR1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sec61a2Q9JLR1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.43■□□□□ 0.54
Sec61a2Q9JLR1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sec61a2Q9JLR1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Sec61a2Q9JLR1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sec61a2Q9JLR1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sec61a2Q9JLR1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Sec61a2Q9JLR1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sec61a2Q9JLR1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sec61a2Q9JLR1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sec61a2Q9JLR1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sec61a2Q9JLR1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sec61a2Q9JLR1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sec61a2Q9JLR1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sec61a2Q9JLR1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sec61a2Q9JLR1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.41■□□□□ 0.54
Sec61a2Q9JLR1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sec61a2Q9JLR1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sec61a2Q9JLR1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sec61a2Q9JLR1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms