Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smco4Q9JIS3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smco4Q9JIS3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Smco4Q9JIS3 Gm43863-201ENSMUST00000203822 1192 ntBASIC16.62■□□□□ 0.25
Smco4Q9JIS3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smco4Q9JIS3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smco4Q9JIS3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smco4Q9JIS3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smco4Q9JIS3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smco4Q9JIS3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smco4Q9JIS3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smco4Q9JIS3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Smco4Q9JIS3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smco4Q9JIS3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smco4Q9JIS3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.61■□□□□ 0.25
Smco4Q9JIS3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Smco4Q9JIS3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Smco4Q9JIS3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smco4Q9JIS3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smco4Q9JIS3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smco4Q9JIS3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Smco4Q9JIS3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smco4Q9JIS3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smco4Q9JIS3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smco4Q9JIS3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smco4Q9JIS3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smco4Q9JIS3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smco4Q9JIS3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smco4Q9JIS3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Smco4Q9JIS3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smco4Q9JIS3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Smco4Q9JIS3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smco4Q9JIS3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smco4Q9JIS3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smco4Q9JIS3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.6■□□□□ 0.25
Smco4Q9JIS3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smco4Q9JIS3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smco4Q9JIS3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.6■□□□□ 0.25
Smco4Q9JIS3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
Smco4Q9JIS3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Smco4Q9JIS3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smco4Q9JIS3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Smco4Q9JIS3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smco4Q9JIS3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smco4Q9JIS3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smco4Q9JIS3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Smco4Q9JIS3 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.59■□□□□ 0.25
Smco4Q9JIS3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smco4Q9JIS3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.59■□□□□ 0.25
Smco4Q9JIS3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smco4Q9JIS3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.58■□□□□ 0.25
Smco4Q9JIS3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smco4Q9JIS3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Smco4Q9JIS3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Smco4Q9JIS3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smco4Q9JIS3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.58■□□□□ 0.25
Smco4Q9JIS3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Smco4Q9JIS3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smco4Q9JIS3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smco4Q9JIS3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smco4Q9JIS3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smco4Q9JIS3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smco4Q9JIS3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smco4Q9JIS3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Smco4Q9JIS3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smco4Q9JIS3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Smco4Q9JIS3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smco4Q9JIS3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smco4Q9JIS3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smco4Q9JIS3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smco4Q9JIS3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smco4Q9JIS3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smco4Q9JIS3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smco4Q9JIS3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smco4Q9JIS3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smco4Q9JIS3 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.57■□□□□ 0.24
Smco4Q9JIS3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smco4Q9JIS3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smco4Q9JIS3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Smco4Q9JIS3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smco4Q9JIS3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smco4Q9JIS3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.57■□□□□ 0.24
Smco4Q9JIS3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smco4Q9JIS3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smco4Q9JIS3 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Smco4Q9JIS3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smco4Q9JIS3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Smco4Q9JIS3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Smco4Q9JIS3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.56■□□□□ 0.24
Smco4Q9JIS3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smco4Q9JIS3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smco4Q9JIS3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smco4Q9JIS3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC16.56■□□□□ 0.24
Smco4Q9JIS3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.56■□□□□ 0.24
Smco4Q9JIS3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Smco4Q9JIS3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Smco4Q9JIS3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
Smco4Q9JIS3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Smco4Q9JIS3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smco4Q9JIS3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms