Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lime1Q9EQR5 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lime1Q9EQR5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Lime1Q9EQR5 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lime1Q9EQR5 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lime1Q9EQR5 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lime1Q9EQR5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lime1Q9EQR5 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lime1Q9EQR5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lime1Q9EQR5 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lime1Q9EQR5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lime1Q9EQR5 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lime1Q9EQR5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lime1Q9EQR5 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.05■□□□□ 0.48
Lime1Q9EQR5 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lime1Q9EQR5 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Lime1Q9EQR5 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Lime1Q9EQR5 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lime1Q9EQR5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lime1Q9EQR5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lime1Q9EQR5 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Lime1Q9EQR5 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lime1Q9EQR5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lime1Q9EQR5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Lime1Q9EQR5 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lime1Q9EQR5 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lime1Q9EQR5 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Lime1Q9EQR5 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lime1Q9EQR5 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.04■□□□□ 0.48
Lime1Q9EQR5 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.04■□□□□ 0.48
Lime1Q9EQR5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lime1Q9EQR5 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.04■□□□□ 0.48
Lime1Q9EQR5 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lime1Q9EQR5 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lime1Q9EQR5 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lime1Q9EQR5 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lime1Q9EQR5 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lime1Q9EQR5 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lime1Q9EQR5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lime1Q9EQR5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lime1Q9EQR5 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lime1Q9EQR5 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lime1Q9EQR5 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lime1Q9EQR5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Lime1Q9EQR5 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Lime1Q9EQR5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lime1Q9EQR5 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.03■□□□□ 0.48
Lime1Q9EQR5 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.02■□□□□ 0.48
Lime1Q9EQR5 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lime1Q9EQR5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lime1Q9EQR5 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lime1Q9EQR5 Gm10420-201ENSMUST00000121713 882 ntBASIC18.02■□□□□ 0.48
Lime1Q9EQR5 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Lime1Q9EQR5 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Lime1Q9EQR5 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Lime1Q9EQR5 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lime1Q9EQR5 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lime1Q9EQR5 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Lime1Q9EQR5 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lime1Q9EQR5 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lime1Q9EQR5 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lime1Q9EQR5 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lime1Q9EQR5 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lime1Q9EQR5 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lime1Q9EQR5 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.01■□□□□ 0.47
Lime1Q9EQR5 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.01■□□□□ 0.47
Lime1Q9EQR5 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lime1Q9EQR5 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lime1Q9EQR5 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lime1Q9EQR5 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lime1Q9EQR5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lime1Q9EQR5 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lime1Q9EQR5 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lime1Q9EQR5 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18■□□□□ 0.47
Lime1Q9EQR5 Gm12366-201ENSMUST00000121722 873 ntBASIC18■□□□□ 0.47
Lime1Q9EQR5 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18■□□□□ 0.47
Lime1Q9EQR5 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18■□□□□ 0.47
Lime1Q9EQR5 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18■□□□□ 0.47
Lime1Q9EQR5 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18■□□□□ 0.47
Lime1Q9EQR5 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18■□□□□ 0.47
Lime1Q9EQR5 Gm5786-201ENSMUST00000085368 882 ntBASIC18■□□□□ 0.47
Lime1Q9EQR5 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18■□□□□ 0.47
Lime1Q9EQR5 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lime1Q9EQR5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Lime1Q9EQR5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lime1Q9EQR5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lime1Q9EQR5 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Lime1Q9EQR5 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.99■□□□□ 0.47
Lime1Q9EQR5 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lime1Q9EQR5 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lime1Q9EQR5 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lime1Q9EQR5 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lime1Q9EQR5 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lime1Q9EQR5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lime1Q9EQR5 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lime1Q9EQR5 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Lime1Q9EQR5 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lime1Q9EQR5 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lime1Q9EQR5 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lime1Q9EQR5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms