Protein–RNA interactions for Protein: Q9D8T0

Fam3a, Protein FAM3A, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam3aQ9D8T0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.39■■□□□ 1.02
Fam3aQ9D8T0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Fam3aQ9D8T0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Fam3aQ9D8T0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Fam3aQ9D8T0 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.39■■□□□ 1.01
Fam3aQ9D8T0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.38■■□□□ 1.01
Fam3aQ9D8T0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Fam3aQ9D8T0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Fam3aQ9D8T0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Fam3aQ9D8T0 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.37■■□□□ 1.01
Fam3aQ9D8T0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.37■■□□□ 1.01
Fam3aQ9D8T0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.37■■□□□ 1.01
Fam3aQ9D8T0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.37■■□□□ 1.01
Fam3aQ9D8T0 Gm9959-201ENSMUST00000068277 390 ntBASIC21.37■■□□□ 1.01
Fam3aQ9D8T0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
Fam3aQ9D8T0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Fam3aQ9D8T0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Fam3aQ9D8T0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Fam3aQ9D8T0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Fam3aQ9D8T0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Fam3aQ9D8T0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Fam3aQ9D8T0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Fam3aQ9D8T0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Fam3aQ9D8T0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Fam3aQ9D8T0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Fam3aQ9D8T0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Fam3aQ9D8T0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Fam3aQ9D8T0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Fam3aQ9D8T0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Fam3aQ9D8T0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Fam3aQ9D8T0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.34■■□□□ 1.01
Fam3aQ9D8T0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Fam3aQ9D8T0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Fam3aQ9D8T0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Fam3aQ9D8T0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Fam3aQ9D8T0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Fam3aQ9D8T0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.33■■□□□ 1
Fam3aQ9D8T0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.33■■□□□ 1
Fam3aQ9D8T0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Fam3aQ9D8T0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Fam3aQ9D8T0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Fam3aQ9D8T0 Etf1-202ENSMUST00000180351 108 ntBASIC21.32■■□□□ 1
Fam3aQ9D8T0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.32■■□□□ 1
Fam3aQ9D8T0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.32■■□□□ 1
Fam3aQ9D8T0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.32■■□□□ 1
Fam3aQ9D8T0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.32■■□□□ 1
Fam3aQ9D8T0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.32■■□□□ 1
Fam3aQ9D8T0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.32■■□□□ 1
Fam3aQ9D8T0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Fam3aQ9D8T0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.31■■□□□ 1
Fam3aQ9D8T0 Gm7417-201ENSMUST00000192950 473 ntBASIC21.31■■□□□ 1
Fam3aQ9D8T0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Fam3aQ9D8T0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Fam3aQ9D8T0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Fam3aQ9D8T0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Fam3aQ9D8T0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fam3aQ9D8T0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.3■■□□□ 1
Fam3aQ9D8T0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Fam3aQ9D8T0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.3■■□□□ 1
Fam3aQ9D8T0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fam3aQ9D8T0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.3■■□□□ 1
Fam3aQ9D8T0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fam3aQ9D8T0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Fam3aQ9D8T0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Fam3aQ9D8T0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.29■■□□□ 1
Fam3aQ9D8T0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Fam3aQ9D8T0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.29■■□□□ 1
Fam3aQ9D8T0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Fam3aQ9D8T0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.29■■□□□ 1
Fam3aQ9D8T0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fam3aQ9D8T0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Fam3aQ9D8T0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.28■■□□□ 1
Fam3aQ9D8T0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fam3aQ9D8T0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fam3aQ9D8T0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fam3aQ9D8T0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fam3aQ9D8T0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.28■■□□□ 1
Fam3aQ9D8T0 Gm45102-201ENSMUST00000207427 857 ntBASIC21.28■■□□□ 1
Fam3aQ9D8T0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.28■■□□□ 1
Fam3aQ9D8T0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fam3aQ9D8T0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.28■■□□□ 1
Fam3aQ9D8T0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Fam3aQ9D8T0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fam3aQ9D8T0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fam3aQ9D8T0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fam3aQ9D8T0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
Fam3aQ9D8T0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Fam3aQ9D8T0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Fam3aQ9D8T0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Fam3aQ9D8T0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Fam3aQ9D8T0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Fam3aQ9D8T0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Fam3aQ9D8T0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Fam3aQ9D8T0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Fam3aQ9D8T0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Fam3aQ9D8T0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Fam3aQ9D8T0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Fam3aQ9D8T0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Fam3aQ9D8T0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Fam3aQ9D8T0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms