Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Chd1lQ9CXF7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Chd1lQ9CXF7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Chd1lQ9CXF7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Chd1lQ9CXF7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Chd1lQ9CXF7 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.38■■□□□ 1.33
Chd1lQ9CXF7 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Chd1lQ9CXF7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Chd1lQ9CXF7 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Chd1lQ9CXF7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Chd1lQ9CXF7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Chd1lQ9CXF7 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.37■■□□□ 1.33
Chd1lQ9CXF7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Chd1lQ9CXF7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
Chd1lQ9CXF7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Chd1lQ9CXF7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Chd1lQ9CXF7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Chd1lQ9CXF7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Chd1lQ9CXF7 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.36■■□□□ 1.33
Chd1lQ9CXF7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Chd1lQ9CXF7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Chd1lQ9CXF7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Chd1lQ9CXF7 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Chd1lQ9CXF7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Chd1lQ9CXF7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Chd1lQ9CXF7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC23.35■■□□□ 1.33
Chd1lQ9CXF7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC23.35■■□□□ 1.33
Chd1lQ9CXF7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Chd1lQ9CXF7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC23.35■■□□□ 1.33
Chd1lQ9CXF7 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Chd1lQ9CXF7 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.35■■□□□ 1.33
Chd1lQ9CXF7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Chd1lQ9CXF7 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.34■■□□□ 1.33
Chd1lQ9CXF7 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Chd1lQ9CXF7 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Chd1lQ9CXF7 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.34■■□□□ 1.33
Chd1lQ9CXF7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Chd1lQ9CXF7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
Chd1lQ9CXF7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC23.34■■□□□ 1.33
Chd1lQ9CXF7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Chd1lQ9CXF7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Chd1lQ9CXF7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Chd1lQ9CXF7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Chd1lQ9CXF7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Chd1lQ9CXF7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Chd1lQ9CXF7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Chd1lQ9CXF7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Chd1lQ9CXF7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Chd1lQ9CXF7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC23.32■■□□□ 1.32
Chd1lQ9CXF7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Chd1lQ9CXF7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Chd1lQ9CXF7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Chd1lQ9CXF7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.32■■□□□ 1.32
Chd1lQ9CXF7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Chd1lQ9CXF7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Chd1lQ9CXF7 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Chd1lQ9CXF7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Chd1lQ9CXF7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Chd1lQ9CXF7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Chd1lQ9CXF7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Chd1lQ9CXF7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.31■■□□□ 1.32
Chd1lQ9CXF7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Chd1lQ9CXF7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Chd1lQ9CXF7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC23.31■■□□□ 1.32
Chd1lQ9CXF7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC23.3■■□□□ 1.32
Chd1lQ9CXF7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Chd1lQ9CXF7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Chd1lQ9CXF7 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Chd1lQ9CXF7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Chd1lQ9CXF7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Chd1lQ9CXF7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.29■■□□□ 1.32
Chd1lQ9CXF7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Chd1lQ9CXF7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Chd1lQ9CXF7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Chd1lQ9CXF7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Chd1lQ9CXF7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Chd1lQ9CXF7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Chd1lQ9CXF7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Chd1lQ9CXF7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Chd1lQ9CXF7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Chd1lQ9CXF7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Chd1lQ9CXF7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC23.27■■□□□ 1.32
Chd1lQ9CXF7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Chd1lQ9CXF7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Chd1lQ9CXF7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Chd1lQ9CXF7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC23.27■■□□□ 1.32
Chd1lQ9CXF7 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Chd1lQ9CXF7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Chd1lQ9CXF7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Chd1lQ9CXF7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Chd1lQ9CXF7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Chd1lQ9CXF7 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.26■■□□□ 1.31
Chd1lQ9CXF7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Chd1lQ9CXF7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Chd1lQ9CXF7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Chd1lQ9CXF7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Chd1lQ9CXF7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Chd1lQ9CXF7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Chd1lQ9CXF7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Chd1lQ9CXF7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms