Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha11Q91Y19 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha11Q91Y19 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha11Q91Y19 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha11Q91Y19 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha11Q91Y19 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha11Q91Y19 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha11Q91Y19 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Pcdha11Q91Y19 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha11Q91Y19 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Pcdha11Q91Y19 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Pcdha11Q91Y19 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha11Q91Y19 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Pcdha11Q91Y19 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha11Q91Y19 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdha11Q91Y19 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdha11Q91Y19 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdha11Q91Y19 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdha11Q91Y19 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.72■■□□□ 1.07
Pcdha11Q91Y19 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdha11Q91Y19 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdha11Q91Y19 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdha11Q91Y19 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha11Q91Y19 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha11Q91Y19 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha11Q91Y19 Gm12922-201ENSMUST00000120626 809 ntBASIC21.71■■□□□ 1.07
Pcdha11Q91Y19 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha11Q91Y19 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha11Q91Y19 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha11Q91Y19 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Pcdha11Q91Y19 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha11Q91Y19 Gm9870-201ENSMUST00000063874 645 ntBASIC21.7■■□□□ 1.06
Pcdha11Q91Y19 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.7■■□□□ 1.06
Pcdha11Q91Y19 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha11Q91Y19 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
Pcdha11Q91Y19 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha11Q91Y19 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha11Q91Y19 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Pcdha11Q91Y19 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.69■■□□□ 1.06
Pcdha11Q91Y19 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.69■■□□□ 1.06
Pcdha11Q91Y19 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha11Q91Y19 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.69■■□□□ 1.06
Pcdha11Q91Y19 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.69■■□□□ 1.06
Pcdha11Q91Y19 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha11Q91Y19 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.68■■□□□ 1.06
Pcdha11Q91Y19 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
Pcdha11Q91Y19 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.68■■□□□ 1.06
Pcdha11Q91Y19 Gm13241-201ENSMUST00000094493 780 ntBASIC21.68■■□□□ 1.06
Pcdha11Q91Y19 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Pcdha11Q91Y19 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha11Q91Y19 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.67■■□□□ 1.06
Pcdha11Q91Y19 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdha11Q91Y19 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdha11Q91Y19 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdha11Q91Y19 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdha11Q91Y19 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.67■■□□□ 1.06
Pcdha11Q91Y19 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Pcdha11Q91Y19 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdha11Q91Y19 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.67■■□□□ 1.06
Pcdha11Q91Y19 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.67■■□□□ 1.06
Pcdha11Q91Y19 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.67■■□□□ 1.06
Pcdha11Q91Y19 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.67■■□□□ 1.06
Pcdha11Q91Y19 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Pcdha11Q91Y19 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdha11Q91Y19 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.66■■□□□ 1.06
Pcdha11Q91Y19 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdha11Q91Y19 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdha11Q91Y19 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdha11Q91Y19 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdha11Q91Y19 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.66■■□□□ 1.06
Pcdha11Q91Y19 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.66■■□□□ 1.06
Pcdha11Q91Y19 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdha11Q91Y19 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.66■■□□□ 1.06
Pcdha11Q91Y19 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdha11Q91Y19 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdha11Q91Y19 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Pcdha11Q91Y19 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.65■■□□□ 1.06
Pcdha11Q91Y19 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdha11Q91Y19 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdha11Q91Y19 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdha11Q91Y19 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdha11Q91Y19 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdha11Q91Y19 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Pcdha11Q91Y19 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdha11Q91Y19 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.64■■□□□ 1.06
Pcdha11Q91Y19 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdha11Q91Y19 Gm7143-201ENSMUST00000222811 859 ntBASIC21.64■■□□□ 1.05
Pcdha11Q91Y19 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdha11Q91Y19 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdha11Q91Y19 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdha11Q91Y19 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha11Q91Y19 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha11Q91Y19 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha11Q91Y19 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.63■■□□□ 1.05
Pcdha11Q91Y19 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.63■■□□□ 1.05
Pcdha11Q91Y19 Golgb1-201ENSMUST00000023534 498 ntBASIC21.63■■□□□ 1.05
Pcdha11Q91Y19 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha11Q91Y19 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha11Q91Y19 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha11Q91Y19 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms