Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Pcdhgc3Q91XX1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgc3Q91XX1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgc3Q91XX1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.46■□□□□ 0.71
Pcdhgc3Q91XX1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Pcdhgc3Q91XX1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgc3Q91XX1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Pcdhgc3Q91XX1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgc3Q91XX1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgc3Q91XX1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgc3Q91XX1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgc3Q91XX1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgc3Q91XX1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhgc3Q91XX1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgc3Q91XX1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhgc3Q91XX1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgc3Q91XX1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgc3Q91XX1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgc3Q91XX1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgc3Q91XX1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhgc3Q91XX1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgc3Q91XX1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgc3Q91XX1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgc3Q91XX1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pcdhgc3Q91XX1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgc3Q91XX1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pcdhgc3Q91XX1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.44■□□□□ 0.7
Pcdhgc3Q91XX1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgc3Q91XX1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgc3Q91XX1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgc3Q91XX1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.44■□□□□ 0.7
Pcdhgc3Q91XX1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgc3Q91XX1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgc3Q91XX1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdhgc3Q91XX1 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.44■□□□□ 0.7
Pcdhgc3Q91XX1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Pcdhgc3Q91XX1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgc3Q91XX1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgc3Q91XX1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.43■□□□□ 0.7
Pcdhgc3Q91XX1 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.43■□□□□ 0.7
Pcdhgc3Q91XX1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgc3Q91XX1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgc3Q91XX1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgc3Q91XX1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgc3Q91XX1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Pcdhgc3Q91XX1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.42■□□□□ 0.7
Pcdhgc3Q91XX1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgc3Q91XX1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgc3Q91XX1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pcdhgc3Q91XX1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Pcdhgc3Q91XX1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgc3Q91XX1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgc3Q91XX1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Pcdhgc3Q91XX1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgc3Q91XX1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgc3Q91XX1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgc3Q91XX1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.41■□□□□ 0.7
Pcdhgc3Q91XX1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgc3Q91XX1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgc3Q91XX1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgc3Q91XX1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgc3Q91XX1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgc3Q91XX1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgc3Q91XX1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgc3Q91XX1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgc3Q91XX1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgc3Q91XX1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgc3Q91XX1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgc3Q91XX1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgc3Q91XX1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgc3Q91XX1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgc3Q91XX1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Pcdhgc3Q91XX1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgc3Q91XX1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.4■□□□□ 0.7
Pcdhgc3Q91XX1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgc3Q91XX1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgc3Q91XX1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgc3Q91XX1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Pcdhgc3Q91XX1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Pcdhgc3Q91XX1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhgc3Q91XX1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgc3Q91XX1 Gm9806-201ENSMUST00000051080 552 ntBASIC19.39■□□□□ 0.69
Pcdhgc3Q91XX1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgc3Q91XX1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgc3Q91XX1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgc3Q91XX1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgc3Q91XX1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.39■□□□□ 0.69
Pcdhgc3Q91XX1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgc3Q91XX1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdhgc3Q91XX1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdhgc3Q91XX1 Gm11687-201ENSMUST00000118911 886 ntBASIC19.38■□□□□ 0.69
Pcdhgc3Q91XX1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdhgc3Q91XX1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgc3Q91XX1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgc3Q91XX1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Pcdhgc3Q91XX1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgc3Q91XX1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcdhgc3Q91XX1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgc3Q91XX1 Scarna2-201ENSMUST00000157560 414 ntBASIC19.37■□□□□ 0.69
Pcdhgc3Q91XX1 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms