Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb11Q91UZ8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb11Q91UZ8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb11Q91UZ8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb11Q91UZ8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb11Q91UZ8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.22■□□□□ 0.99
Pcdhb11Q91UZ8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb11Q91UZ8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb11Q91UZ8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb11Q91UZ8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb11Q91UZ8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.21■□□□□ 0.99
Pcdhb11Q91UZ8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb11Q91UZ8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.21■□□□□ 0.99
Pcdhb11Q91UZ8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Pcdhb11Q91UZ8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Pcdhb11Q91UZ8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Pcdhb11Q91UZ8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Pcdhb11Q91UZ8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb11Q91UZ8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.2■□□□□ 0.98
Pcdhb11Q91UZ8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb11Q91UZ8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb11Q91UZ8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb11Q91UZ8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb11Q91UZ8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Pcdhb11Q91UZ8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.19■□□□□ 0.98
Pcdhb11Q91UZ8 Gm45102-201ENSMUST00000207427 857 ntBASIC21.19■□□□□ 0.98
Pcdhb11Q91UZ8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb11Q91UZ8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb11Q91UZ8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb11Q91UZ8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Pcdhb11Q91UZ8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb11Q91UZ8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.18■□□□□ 0.98
Pcdhb11Q91UZ8 Etf1-202ENSMUST00000180351 108 ntBASIC21.18■□□□□ 0.98
Pcdhb11Q91UZ8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb11Q91UZ8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb11Q91UZ8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.17■□□□□ 0.98
Pcdhb11Q91UZ8 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.17■□□□□ 0.98
Pcdhb11Q91UZ8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb11Q91UZ8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb11Q91UZ8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb11Q91UZ8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.16■□□□□ 0.98
Pcdhb11Q91UZ8 Gm7417-201ENSMUST00000192950 473 ntBASIC21.16■□□□□ 0.98
Pcdhb11Q91UZ8 Rps24-207ENSMUST00000224568 714 ntBASIC21.16■□□□□ 0.98
Pcdhb11Q91UZ8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb11Q91UZ8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb11Q91UZ8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Pcdhb11Q91UZ8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.15■□□□□ 0.98
Pcdhb11Q91UZ8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.15■□□□□ 0.98
Pcdhb11Q91UZ8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.15■□□□□ 0.98
Pcdhb11Q91UZ8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb11Q91UZ8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb11Q91UZ8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb11Q91UZ8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb11Q91UZ8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhb11Q91UZ8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhb11Q91UZ8 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.14■□□□□ 0.98
Pcdhb11Q91UZ8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb11Q91UZ8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Pcdhb11Q91UZ8 Gm14117-201ENSMUST00000122417 843 ntBASIC21.14■□□□□ 0.97
Pcdhb11Q91UZ8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.14■□□□□ 0.97
Pcdhb11Q91UZ8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.14■□□□□ 0.97
Pcdhb11Q91UZ8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb11Q91UZ8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb11Q91UZ8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb11Q91UZ8 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.14■□□□□ 0.97
Pcdhb11Q91UZ8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb11Q91UZ8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb11Q91UZ8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb11Q91UZ8 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.13■□□□□ 0.97
Pcdhb11Q91UZ8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb11Q91UZ8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.13■□□□□ 0.97
Pcdhb11Q91UZ8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Pcdhb11Q91UZ8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb11Q91UZ8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb11Q91UZ8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb11Q91UZ8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb11Q91UZ8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb11Q91UZ8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Pcdhb11Q91UZ8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.12■□□□□ 0.97
Pcdhb11Q91UZ8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb11Q91UZ8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
Pcdhb11Q91UZ8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.12■□□□□ 0.97
Pcdhb11Q91UZ8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Pcdhb11Q91UZ8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Pcdhb11Q91UZ8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb11Q91UZ8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.11■□□□□ 0.97
Pcdhb11Q91UZ8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb11Q91UZ8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb11Q91UZ8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb11Q91UZ8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb11Q91UZ8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb11Q91UZ8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.11■□□□□ 0.97
Pcdhb11Q91UZ8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb11Q91UZ8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.11■□□□□ 0.97
Pcdhb11Q91UZ8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb11Q91UZ8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb11Q91UZ8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb11Q91UZ8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Pcdhb11Q91UZ8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb11Q91UZ8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 109.1 ms