Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdhr1Q8VHP6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.18■□□□□ 0.82
Cdhr1Q8VHP6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cdhr1Q8VHP6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdhr1Q8VHP6 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdhr1Q8VHP6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdhr1Q8VHP6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cdhr1Q8VHP6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.17■□□□□ 0.82
Cdhr1Q8VHP6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdhr1Q8VHP6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdhr1Q8VHP6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cdhr1Q8VHP6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Cdhr1Q8VHP6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.17■□□□□ 0.82
Cdhr1Q8VHP6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
Cdhr1Q8VHP6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Cdhr1Q8VHP6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdhr1Q8VHP6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdhr1Q8VHP6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cdhr1Q8VHP6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Cdhr1Q8VHP6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdhr1Q8VHP6 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.15■□□□□ 0.82
Cdhr1Q8VHP6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdhr1Q8VHP6 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdhr1Q8VHP6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cdhr1Q8VHP6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cdhr1Q8VHP6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Cdhr1Q8VHP6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cdhr1Q8VHP6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdhr1Q8VHP6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdhr1Q8VHP6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdhr1Q8VHP6 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Cdhr1Q8VHP6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdhr1Q8VHP6 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdhr1Q8VHP6 Serp2-204ENSMUST00000228055 705 ntBASIC20.14■□□□□ 0.81
Cdhr1Q8VHP6 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdhr1Q8VHP6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdhr1Q8VHP6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdhr1Q8VHP6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdhr1Q8VHP6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdhr1Q8VHP6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdhr1Q8VHP6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdhr1Q8VHP6 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdhr1Q8VHP6 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Cdhr1Q8VHP6 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdhr1Q8VHP6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Cdhr1Q8VHP6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cdhr1Q8VHP6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdhr1Q8VHP6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdhr1Q8VHP6 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.12■□□□□ 0.81
Cdhr1Q8VHP6 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdhr1Q8VHP6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdhr1Q8VHP6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdhr1Q8VHP6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdhr1Q8VHP6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.12■□□□□ 0.81
Cdhr1Q8VHP6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdhr1Q8VHP6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.11■□□□□ 0.81
Cdhr1Q8VHP6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cdhr1Q8VHP6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cdhr1Q8VHP6 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.11■□□□□ 0.81
Cdhr1Q8VHP6 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.11■□□□□ 0.81
Cdhr1Q8VHP6 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cdhr1Q8VHP6 Gm7143-201ENSMUST00000222811 859 ntBASIC20.11■□□□□ 0.81
Cdhr1Q8VHP6 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdhr1Q8VHP6 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdhr1Q8VHP6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Cdhr1Q8VHP6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdhr1Q8VHP6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdhr1Q8VHP6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.1■□□□□ 0.81
Cdhr1Q8VHP6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.1■□□□□ 0.81
Cdhr1Q8VHP6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdhr1Q8VHP6 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdhr1Q8VHP6 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.1■□□□□ 0.81
Cdhr1Q8VHP6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdhr1Q8VHP6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cdhr1Q8VHP6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Cdhr1Q8VHP6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.1■□□□□ 0.81
Cdhr1Q8VHP6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cdhr1Q8VHP6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdhr1Q8VHP6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Cdhr1Q8VHP6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdhr1Q8VHP6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdhr1Q8VHP6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cdhr1Q8VHP6 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdhr1Q8VHP6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.09■□□□□ 0.81
Cdhr1Q8VHP6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cdhr1Q8VHP6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdhr1Q8VHP6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Cdhr1Q8VHP6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdhr1Q8VHP6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cdhr1Q8VHP6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Cdhr1Q8VHP6 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Cdhr1Q8VHP6 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.08■□□□□ 0.81
Cdhr1Q8VHP6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdhr1Q8VHP6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdhr1Q8VHP6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdhr1Q8VHP6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Cdhr1Q8VHP6 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdhr1Q8VHP6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Cdhr1Q8VHP6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cdhr1Q8VHP6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms