Protein–RNA interactions for Protein: Q8R480

Nup85, Nuclear pore complex protein Nup85, mousemouse

Known RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup85Q8R480 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nup85Q8R480 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.15■□□□□ 0.98
Nup85Q8R480 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nup85Q8R480 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Nup85Q8R480 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Nup85Q8R480 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nup85Q8R480 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Nup85Q8R480 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nup85Q8R480 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.14■□□□□ 0.97
Nup85Q8R480 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.14■□□□□ 0.97
Nup85Q8R480 Gm40881-201ENSMUST00000223397 166 ntBASIC21.14■□□□□ 0.97
Nup85Q8R480 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.14■□□□□ 0.97
Nup85Q8R480 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nup85Q8R480 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.14■□□□□ 0.97
Nup85Q8R480 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.14■□□□□ 0.97
Nup85Q8R480 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nup85Q8R480 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nup85Q8R480 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nup85Q8R480 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nup85Q8R480 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nup85Q8R480 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.13■□□□□ 0.97
Nup85Q8R480 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Nup85Q8R480 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nup85Q8R480 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nup85Q8R480 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Nup85Q8R480 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nup85Q8R480 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nup85Q8R480 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nup85Q8R480 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nup85Q8R480 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nup85Q8R480 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nup85Q8R480 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.12■□□□□ 0.97
Nup85Q8R480 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nup85Q8R480 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Nup85Q8R480 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nup85Q8R480 Gm10399-202ENSMUST00000202768 748 ntBASIC21.11■□□□□ 0.97
Nup85Q8R480 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nup85Q8R480 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nup85Q8R480 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nup85Q8R480 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nup85Q8R480 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nup85Q8R480 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nup85Q8R480 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.1■□□□□ 0.97
Nup85Q8R480 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Nup85Q8R480 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nup85Q8R480 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nup85Q8R480 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nup85Q8R480 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.09■□□□□ 0.97
Nup85Q8R480 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nup85Q8R480 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.09■□□□□ 0.97
Nup85Q8R480 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Nup85Q8R480 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Nup85Q8R480 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nup85Q8R480 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Nup85Q8R480 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nup85Q8R480 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Nup85Q8R480 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Nup85Q8R480 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.08■□□□□ 0.97
Nup85Q8R480 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nup85Q8R480 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Nup85Q8R480 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nup85Q8R480 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Nup85Q8R480 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.07■□□□□ 0.96
Nup85Q8R480 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nup85Q8R480 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Nup85Q8R480 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nup85Q8R480 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nup85Q8R480 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nup85Q8R480 Gm15039-201ENSMUST00000118914 875 ntBASIC21.06■□□□□ 0.96
Nup85Q8R480 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.06■□□□□ 0.96
Nup85Q8R480 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Nup85Q8R480 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nup85Q8R480 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
Nup85Q8R480 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.06■□□□□ 0.96
Nup85Q8R480 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nup85Q8R480 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nup85Q8R480 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.05■□□□□ 0.96
Nup85Q8R480 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.05■□□□□ 0.96
Nup85Q8R480 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.05■□□□□ 0.96
Nup85Q8R480 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nup85Q8R480 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nup85Q8R480 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nup85Q8R480 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nup85Q8R480 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nup85Q8R480 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nup85Q8R480 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.04■□□□□ 0.96
Nup85Q8R480 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.04■□□□□ 0.96
Nup85Q8R480 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nup85Q8R480 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nup85Q8R480 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nup85Q8R480 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nup85Q8R480 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nup85Q8R480 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Nup85Q8R480 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nup85Q8R480 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nup85Q8R480 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nup85Q8R480 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nup85Q8R480 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nup85Q8R480 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nup85Q8R480 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms