Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Treml1Q8K558 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Treml1Q8K558 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Treml1Q8K558 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Treml1Q8K558 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
Treml1Q8K558 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Treml1Q8K558 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Treml1Q8K558 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Treml1Q8K558 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.36■□□□□ 0.85
Treml1Q8K558 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.36■□□□□ 0.85
Treml1Q8K558 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Treml1Q8K558 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Treml1Q8K558 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Treml1Q8K558 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.35■□□□□ 0.85
Treml1Q8K558 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Treml1Q8K558 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Treml1Q8K558 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.35■□□□□ 0.85
Treml1Q8K558 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Treml1Q8K558 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Treml1Q8K558 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.34■□□□□ 0.85
Treml1Q8K558 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Treml1Q8K558 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Treml1Q8K558 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.34■□□□□ 0.85
Treml1Q8K558 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
Treml1Q8K558 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Treml1Q8K558 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Treml1Q8K558 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Treml1Q8K558 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Treml1Q8K558 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Treml1Q8K558 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Treml1Q8K558 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Treml1Q8K558 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Treml1Q8K558 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Treml1Q8K558 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Treml1Q8K558 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Treml1Q8K558 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.33■□□□□ 0.85
Treml1Q8K558 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Treml1Q8K558 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Treml1Q8K558 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.33■□□□□ 0.84
Treml1Q8K558 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Treml1Q8K558 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Treml1Q8K558 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Treml1Q8K558 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.32■□□□□ 0.84
Treml1Q8K558 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Treml1Q8K558 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Treml1Q8K558 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Treml1Q8K558 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
Treml1Q8K558 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Treml1Q8K558 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.32■□□□□ 0.84
Treml1Q8K558 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Treml1Q8K558 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Treml1Q8K558 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Treml1Q8K558 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Treml1Q8K558 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.31■□□□□ 0.84
Treml1Q8K558 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Treml1Q8K558 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Treml1Q8K558 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Treml1Q8K558 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Treml1Q8K558 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.3■□□□□ 0.84
Treml1Q8K558 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Treml1Q8K558 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Treml1Q8K558 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.3■□□□□ 0.84
Treml1Q8K558 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Treml1Q8K558 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Treml1Q8K558 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Treml1Q8K558 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Treml1Q8K558 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Treml1Q8K558 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Treml1Q8K558 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Treml1Q8K558 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Treml1Q8K558 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.29■□□□□ 0.84
Treml1Q8K558 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Treml1Q8K558 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Treml1Q8K558 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Treml1Q8K558 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Treml1Q8K558 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Treml1Q8K558 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Treml1Q8K558 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Treml1Q8K558 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Treml1Q8K558 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Treml1Q8K558 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Treml1Q8K558 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Treml1Q8K558 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.28■□□□□ 0.84
Treml1Q8K558 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Treml1Q8K558 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Treml1Q8K558 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Treml1Q8K558 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Treml1Q8K558 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Treml1Q8K558 Gm22238-201ENSMUST00000175222 88 ntBASIC20.27■□□□□ 0.84
Treml1Q8K558 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Treml1Q8K558 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Treml1Q8K558 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Treml1Q8K558 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Treml1Q8K558 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Treml1Q8K558 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Treml1Q8K558 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.26■□□□□ 0.83
Treml1Q8K558 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Treml1Q8K558 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Treml1Q8K558 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Treml1Q8K558 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms