Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cchcr1Q8K2I2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Cchcr1Q8K2I2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC24.46■■□□□ 1.51
Cchcr1Q8K2I2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cchcr1Q8K2I2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cchcr1Q8K2I2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cchcr1Q8K2I2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.51
Cchcr1Q8K2I2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Cchcr1Q8K2I2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Cchcr1Q8K2I2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cchcr1Q8K2I2 Hsf1-207ENSMUST00000228371 2102 ntBASIC24.45■■□□□ 1.5
Cchcr1Q8K2I2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Cchcr1Q8K2I2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cchcr1Q8K2I2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC24.44■■□□□ 1.5
Cchcr1Q8K2I2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cchcr1Q8K2I2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cchcr1Q8K2I2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cchcr1Q8K2I2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC24.44■■□□□ 1.5
Cchcr1Q8K2I2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cchcr1Q8K2I2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cchcr1Q8K2I2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cchcr1Q8K2I2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cchcr1Q8K2I2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cchcr1Q8K2I2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
Cchcr1Q8K2I2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cchcr1Q8K2I2 Gm16464-201ENSMUST00000117815 1095 ntBASIC24.43■■□□□ 1.5
Cchcr1Q8K2I2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Cchcr1Q8K2I2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cchcr1Q8K2I2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cchcr1Q8K2I2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Cchcr1Q8K2I2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cchcr1Q8K2I2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cchcr1Q8K2I2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
Cchcr1Q8K2I2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Cchcr1Q8K2I2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC24.42■■□□□ 1.5
Cchcr1Q8K2I2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Cchcr1Q8K2I2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC24.41■■□□□ 1.5
Cchcr1Q8K2I2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cchcr1Q8K2I2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Cchcr1Q8K2I2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cchcr1Q8K2I2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC24.41■■□□□ 1.5
Cchcr1Q8K2I2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cchcr1Q8K2I2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cchcr1Q8K2I2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Cchcr1Q8K2I2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cchcr1Q8K2I2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Cchcr1Q8K2I2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC24.4■■□□□ 1.5
Cchcr1Q8K2I2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Cchcr1Q8K2I2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Cchcr1Q8K2I2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC24.4■■□□□ 1.5
Cchcr1Q8K2I2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC24.39■■□□□ 1.5
Cchcr1Q8K2I2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Cchcr1Q8K2I2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Cchcr1Q8K2I2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Cchcr1Q8K2I2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Cchcr1Q8K2I2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC24.39■■□□□ 1.49
Cchcr1Q8K2I2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
Cchcr1Q8K2I2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cchcr1Q8K2I2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cchcr1Q8K2I2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cchcr1Q8K2I2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC24.38■■□□□ 1.49
Cchcr1Q8K2I2 Gm5921-201ENSMUST00000075898 882 ntBASIC24.38■■□□□ 1.49
Cchcr1Q8K2I2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cchcr1Q8K2I2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cchcr1Q8K2I2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cchcr1Q8K2I2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC24.37■■□□□ 1.49
Cchcr1Q8K2I2 Gm43566-201ENSMUST00000196851 808 ntBASIC24.37■■□□□ 1.49
Cchcr1Q8K2I2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
Cchcr1Q8K2I2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC24.37■■□□□ 1.49
Cchcr1Q8K2I2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cchcr1Q8K2I2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
Cchcr1Q8K2I2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Cchcr1Q8K2I2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cchcr1Q8K2I2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cchcr1Q8K2I2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cchcr1Q8K2I2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC24.36■■□□□ 1.49
Cchcr1Q8K2I2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cchcr1Q8K2I2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Cchcr1Q8K2I2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cchcr1Q8K2I2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cchcr1Q8K2I2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cchcr1Q8K2I2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Cchcr1Q8K2I2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cchcr1Q8K2I2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cchcr1Q8K2I2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Cchcr1Q8K2I2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cchcr1Q8K2I2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cchcr1Q8K2I2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC24.35■■□□□ 1.49
Cchcr1Q8K2I2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Cchcr1Q8K2I2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cchcr1Q8K2I2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Cchcr1Q8K2I2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cchcr1Q8K2I2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Cchcr1Q8K2I2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cchcr1Q8K2I2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cchcr1Q8K2I2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Cchcr1Q8K2I2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cchcr1Q8K2I2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Cchcr1Q8K2I2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Cchcr1Q8K2I2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms