Protein–RNA interactions for Protein: Q8CGP4

Hist1h2aa, Histone H2A, mousemouse

Predictions only

Length 129 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aaQ8CGP4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hist1h2aaQ8CGP4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hist1h2aaQ8CGP4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hist1h2aaQ8CGP4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hist1h2aaQ8CGP4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hist1h2aaQ8CGP4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hist1h2aaQ8CGP4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hist1h2aaQ8CGP4 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.41■□□□□ 0.7
Hist1h2aaQ8CGP4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hist1h2aaQ8CGP4 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.41■□□□□ 0.7
Hist1h2aaQ8CGP4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hist1h2aaQ8CGP4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hist1h2aaQ8CGP4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hist1h2aaQ8CGP4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hist1h2aaQ8CGP4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hist1h2aaQ8CGP4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hist1h2aaQ8CGP4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.4■□□□□ 0.7
Hist1h2aaQ8CGP4 Gm10399-202ENSMUST00000202768 748 ntBASIC19.4■□□□□ 0.7
Hist1h2aaQ8CGP4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.4■□□□□ 0.7
Hist1h2aaQ8CGP4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.4■□□□□ 0.7
Hist1h2aaQ8CGP4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hist1h2aaQ8CGP4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hist1h2aaQ8CGP4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hist1h2aaQ8CGP4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hist1h2aaQ8CGP4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hist1h2aaQ8CGP4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hist1h2aaQ8CGP4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Hist1h2aaQ8CGP4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.39■□□□□ 0.69
Hist1h2aaQ8CGP4 Gm15820-201ENSMUST00000201566 728 ntBASIC19.39■□□□□ 0.69
Hist1h2aaQ8CGP4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.39■□□□□ 0.69
Hist1h2aaQ8CGP4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.39■□□□□ 0.69
Hist1h2aaQ8CGP4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hist1h2aaQ8CGP4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hist1h2aaQ8CGP4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hist1h2aaQ8CGP4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
Hist1h2aaQ8CGP4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.39■□□□□ 0.69
Hist1h2aaQ8CGP4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hist1h2aaQ8CGP4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hist1h2aaQ8CGP4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Hist1h2aaQ8CGP4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hist1h2aaQ8CGP4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Hist1h2aaQ8CGP4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hist1h2aaQ8CGP4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.38■□□□□ 0.69
Hist1h2aaQ8CGP4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hist1h2aaQ8CGP4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Hist1h2aaQ8CGP4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hist1h2aaQ8CGP4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hist1h2aaQ8CGP4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hist1h2aaQ8CGP4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hist1h2aaQ8CGP4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Hist1h2aaQ8CGP4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Hist1h2aaQ8CGP4 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.37■□□□□ 0.69
Hist1h2aaQ8CGP4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hist1h2aaQ8CGP4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hist1h2aaQ8CGP4 Gm5812-201ENSMUST00000061073 957 ntBASIC19.37■□□□□ 0.69
Hist1h2aaQ8CGP4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hist1h2aaQ8CGP4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Hist1h2aaQ8CGP4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hist1h2aaQ8CGP4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.36■□□□□ 0.69
Hist1h2aaQ8CGP4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hist1h2aaQ8CGP4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hist1h2aaQ8CGP4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.36■□□□□ 0.69
Hist1h2aaQ8CGP4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hist1h2aaQ8CGP4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hist1h2aaQ8CGP4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hist1h2aaQ8CGP4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hist1h2aaQ8CGP4 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.35■□□□□ 0.69
Hist1h2aaQ8CGP4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hist1h2aaQ8CGP4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Hist1h2aaQ8CGP4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
Hist1h2aaQ8CGP4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hist1h2aaQ8CGP4 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.35■□□□□ 0.69
Hist1h2aaQ8CGP4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Hist1h2aaQ8CGP4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hist1h2aaQ8CGP4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hist1h2aaQ8CGP4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hist1h2aaQ8CGP4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Hist1h2aaQ8CGP4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hist1h2aaQ8CGP4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hist1h2aaQ8CGP4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hist1h2aaQ8CGP4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hist1h2aaQ8CGP4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hist1h2aaQ8CGP4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hist1h2aaQ8CGP4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hist1h2aaQ8CGP4 Gm15546-201ENSMUST00000122095 826 ntBASIC19.34■□□□□ 0.69
Hist1h2aaQ8CGP4 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.34■□□□□ 0.69
Hist1h2aaQ8CGP4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hist1h2aaQ8CGP4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hist1h2aaQ8CGP4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hist1h2aaQ8CGP4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Hist1h2aaQ8CGP4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hist1h2aaQ8CGP4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Hist1h2aaQ8CGP4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hist1h2aaQ8CGP4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hist1h2aaQ8CGP4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hist1h2aaQ8CGP4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.33■□□□□ 0.68
Hist1h2aaQ8CGP4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hist1h2aaQ8CGP4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hist1h2aaQ8CGP4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hist1h2aaQ8CGP4 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms