Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd9Q8BYH8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chd9Q8BYH8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd9Q8BYH8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd9Q8BYH8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd9Q8BYH8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chd9Q8BYH8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Chd9Q8BYH8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Chd9Q8BYH8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd9Q8BYH8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd9Q8BYH8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd9Q8BYH8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Chd9Q8BYH8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.6■□□□□ 0.25
Chd9Q8BYH8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.6■□□□□ 0.25
Chd9Q8BYH8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chd9Q8BYH8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd9Q8BYH8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd9Q8BYH8 Gm20760-201ENSMUST00000179197 648 ntBASIC16.59■□□□□ 0.25
Chd9Q8BYH8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chd9Q8BYH8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chd9Q8BYH8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd9Q8BYH8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chd9Q8BYH8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd9Q8BYH8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chd9Q8BYH8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chd9Q8BYH8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chd9Q8BYH8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chd9Q8BYH8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Chd9Q8BYH8 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.58■□□□□ 0.25
Chd9Q8BYH8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.58■□□□□ 0.25
Chd9Q8BYH8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.58■□□□□ 0.24
Chd9Q8BYH8 Gm13836-201ENSMUST00000121159 501 ntBASIC16.58■□□□□ 0.24
Chd9Q8BYH8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd9Q8BYH8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd9Q8BYH8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.57■□□□□ 0.24
Chd9Q8BYH8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd9Q8BYH8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.57■□□□□ 0.24
Chd9Q8BYH8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Chd9Q8BYH8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd9Q8BYH8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd9Q8BYH8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.56■□□□□ 0.24
Chd9Q8BYH8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd9Q8BYH8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Chd9Q8BYH8 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd9Q8BYH8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd9Q8BYH8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd9Q8BYH8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd9Q8BYH8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Chd9Q8BYH8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd9Q8BYH8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd9Q8BYH8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.55■□□□□ 0.24
Chd9Q8BYH8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd9Q8BYH8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.55■□□□□ 0.24
Chd9Q8BYH8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.55■□□□□ 0.24
Chd9Q8BYH8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd9Q8BYH8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd9Q8BYH8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd9Q8BYH8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd9Q8BYH8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd9Q8BYH8 Gm12527-201ENSMUST00000117967 564 ntBASIC16.54■□□□□ 0.24
Chd9Q8BYH8 Gm12441-201ENSMUST00000121806 588 ntBASIC16.54■□□□□ 0.24
Chd9Q8BYH8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.54■□□□□ 0.24
Chd9Q8BYH8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.54■□□□□ 0.24
Chd9Q8BYH8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Chd9Q8BYH8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chd9Q8BYH8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd9Q8BYH8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chd9Q8BYH8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.53■□□□□ 0.24
Chd9Q8BYH8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.53■□□□□ 0.24
Chd9Q8BYH8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd9Q8BYH8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd9Q8BYH8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd9Q8BYH8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd9Q8BYH8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chd9Q8BYH8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd9Q8BYH8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd9Q8BYH8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Chd9Q8BYH8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Chd9Q8BYH8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd9Q8BYH8 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.52■□□□□ 0.24
Chd9Q8BYH8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Chd9Q8BYH8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chd9Q8BYH8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Chd9Q8BYH8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.52■□□□□ 0.23
Chd9Q8BYH8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chd9Q8BYH8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Chd9Q8BYH8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.52■□□□□ 0.23
Chd9Q8BYH8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd9Q8BYH8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chd9Q8BYH8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd9Q8BYH8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.51■□□□□ 0.23
Chd9Q8BYH8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd9Q8BYH8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Chd9Q8BYH8 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.51■□□□□ 0.23
Chd9Q8BYH8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.51■□□□□ 0.23
Chd9Q8BYH8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Chd9Q8BYH8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Chd9Q8BYH8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chd9Q8BYH8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd9Q8BYH8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms