Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.28■□□□□ 0.52
Ube3dQ8BX13 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube3dQ8BX13 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ube3dQ8BX13 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.28■□□□□ 0.52
Ube3dQ8BX13 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube3dQ8BX13 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube3dQ8BX13 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ube3dQ8BX13 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.27■□□□□ 0.52
Ube3dQ8BX13 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.27■□□□□ 0.52
Ube3dQ8BX13 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ube3dQ8BX13 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube3dQ8BX13 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ube3dQ8BX13 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ube3dQ8BX13 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ube3dQ8BX13 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ube3dQ8BX13 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ube3dQ8BX13 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ube3dQ8BX13 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ube3dQ8BX13 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ube3dQ8BX13 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ube3dQ8BX13 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ube3dQ8BX13 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ube3dQ8BX13 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ube3dQ8BX13 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube3dQ8BX13 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube3dQ8BX13 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube3dQ8BX13 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Ube3dQ8BX13 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube3dQ8BX13 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube3dQ8BX13 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube3dQ8BX13 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ube3dQ8BX13 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube3dQ8BX13 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ube3dQ8BX13 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.25■□□□□ 0.51
Ube3dQ8BX13 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.25■□□□□ 0.51
Ube3dQ8BX13 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.25■□□□□ 0.51
Ube3dQ8BX13 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube3dQ8BX13 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube3dQ8BX13 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ube3dQ8BX13 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ube3dQ8BX13 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ube3dQ8BX13 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ube3dQ8BX13 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ube3dQ8BX13 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.24■□□□□ 0.51
Ube3dQ8BX13 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.24■□□□□ 0.51
Ube3dQ8BX13 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.24■□□□□ 0.51
Ube3dQ8BX13 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ube3dQ8BX13 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ube3dQ8BX13 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ube3dQ8BX13 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ube3dQ8BX13 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ube3dQ8BX13 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ube3dQ8BX13 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
Ube3dQ8BX13 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ube3dQ8BX13 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ube3dQ8BX13 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.23■□□□□ 0.51
Ube3dQ8BX13 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ube3dQ8BX13 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.23■□□□□ 0.51
Ube3dQ8BX13 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.23■□□□□ 0.51
Ube3dQ8BX13 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.22■□□□□ 0.51
Ube3dQ8BX13 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Ube3dQ8BX13 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.22■□□□□ 0.51
Ube3dQ8BX13 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube3dQ8BX13 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.22■□□□□ 0.51
Ube3dQ8BX13 Gm7417-201ENSMUST00000192950 473 ntBASIC18.22■□□□□ 0.51
Ube3dQ8BX13 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ube3dQ8BX13 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube3dQ8BX13 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube3dQ8BX13 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube3dQ8BX13 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.21■□□□□ 0.51
Ube3dQ8BX13 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.21■□□□□ 0.51
Ube3dQ8BX13 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube3dQ8BX13 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.21■□□□□ 0.51
Ube3dQ8BX13 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube3dQ8BX13 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube3dQ8BX13 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ube3dQ8BX13 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube3dQ8BX13 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3dQ8BX13 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3dQ8BX13 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3dQ8BX13 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.2■□□□□ 0.5
Ube3dQ8BX13 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3dQ8BX13 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.2■□□□□ 0.5
Ube3dQ8BX13 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.2■□□□□ 0.5
Ube3dQ8BX13 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3dQ8BX13 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3dQ8BX13 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3dQ8BX13 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3dQ8BX13 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.19■□□□□ 0.5
Ube3dQ8BX13 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.19■□□□□ 0.5
Ube3dQ8BX13 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3dQ8BX13 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3dQ8BX13 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.18■□□□□ 0.5
Ube3dQ8BX13 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3dQ8BX13 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3dQ8BX13 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.18■□□□□ 0.5
Ube3dQ8BX13 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.18■□□□□ 0.5
Ube3dQ8BX13 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.18■□□□□ 0.5
Ube3dQ8BX13 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3dQ8BX13 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms