Protein–RNA interactions for Protein: Q8BV79

Trank1, TPR and ankyrin repeat-containing protein 1, mousemouse

Predictions only

Length 2,999 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trank1Q8BV79 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
Trank1Q8BV79 Spcs1-204ENSMUST00000226782 949 ntBASIC18.23■□□□□ 0.51
Trank1Q8BV79 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trank1Q8BV79 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.22■□□□□ 0.51
Trank1Q8BV79 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trank1Q8BV79 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trank1Q8BV79 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.22■□□□□ 0.51
Trank1Q8BV79 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trank1Q8BV79 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.22■□□□□ 0.51
Trank1Q8BV79 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trank1Q8BV79 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trank1Q8BV79 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Trank1Q8BV79 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trank1Q8BV79 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trank1Q8BV79 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trank1Q8BV79 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trank1Q8BV79 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trank1Q8BV79 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.2■□□□□ 0.5
Trank1Q8BV79 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Trank1Q8BV79 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trank1Q8BV79 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trank1Q8BV79 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trank1Q8BV79 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trank1Q8BV79 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trank1Q8BV79 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trank1Q8BV79 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trank1Q8BV79 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Trank1Q8BV79 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trank1Q8BV79 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trank1Q8BV79 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Trank1Q8BV79 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trank1Q8BV79 Gm43060-201ENSMUST00000200621 289 ntBASIC18.18■□□□□ 0.5
Trank1Q8BV79 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trank1Q8BV79 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Trank1Q8BV79 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trank1Q8BV79 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trank1Q8BV79 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.18■□□□□ 0.5
Trank1Q8BV79 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trank1Q8BV79 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trank1Q8BV79 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trank1Q8BV79 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trank1Q8BV79 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
Trank1Q8BV79 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trank1Q8BV79 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trank1Q8BV79 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.17■□□□□ 0.5
Trank1Q8BV79 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trank1Q8BV79 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trank1Q8BV79 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trank1Q8BV79 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trank1Q8BV79 Gm10033-202ENSMUST00000211874 928 ntBASIC18.17■□□□□ 0.5
Trank1Q8BV79 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.17■□□□□ 0.5
Trank1Q8BV79 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trank1Q8BV79 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Trank1Q8BV79 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trank1Q8BV79 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trank1Q8BV79 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trank1Q8BV79 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.16■□□□□ 0.5
Trank1Q8BV79 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.16■□□□□ 0.5
Trank1Q8BV79 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trank1Q8BV79 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trank1Q8BV79 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trank1Q8BV79 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trank1Q8BV79 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trank1Q8BV79 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trank1Q8BV79 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trank1Q8BV79 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trank1Q8BV79 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trank1Q8BV79 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trank1Q8BV79 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trank1Q8BV79 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.15■□□□□ 0.5
Trank1Q8BV79 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trank1Q8BV79 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.15■□□□□ 0.5
Trank1Q8BV79 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.15■□□□□ 0.5
Trank1Q8BV79 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trank1Q8BV79 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trank1Q8BV79 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trank1Q8BV79 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trank1Q8BV79 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Trank1Q8BV79 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trank1Q8BV79 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trank1Q8BV79 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trank1Q8BV79 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trank1Q8BV79 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trank1Q8BV79 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trank1Q8BV79 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.13■□□□□ 0.49
Trank1Q8BV79 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trank1Q8BV79 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.13■□□□□ 0.49
Trank1Q8BV79 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trank1Q8BV79 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trank1Q8BV79 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trank1Q8BV79 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trank1Q8BV79 Gm26833-201ENSMUST00000180899 440 ntBASIC18.12■□□□□ 0.49
Trank1Q8BV79 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trank1Q8BV79 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trank1Q8BV79 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trank1Q8BV79 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trank1Q8BV79 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trank1Q8BV79 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trank1Q8BV79 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trank1Q8BV79 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms