Protein–RNA interactions for Protein: Q8BTU7

Rccd1, RCC1 domain-containing protein 1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rccd1Q8BTU7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rccd1Q8BTU7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rccd1Q8BTU7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rccd1Q8BTU7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.01■□□□□ 0.95
Rccd1Q8BTU7 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rccd1Q8BTU7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.01■□□□□ 0.95
Rccd1Q8BTU7 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.01■□□□□ 0.95
Rccd1Q8BTU7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Rccd1Q8BTU7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rccd1Q8BTU7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.01■□□□□ 0.95
Rccd1Q8BTU7 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rccd1Q8BTU7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rccd1Q8BTU7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rccd1Q8BTU7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Rccd1Q8BTU7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rccd1Q8BTU7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rccd1Q8BTU7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
Rccd1Q8BTU7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rccd1Q8BTU7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rccd1Q8BTU7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Rccd1Q8BTU7 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rccd1Q8BTU7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.99■□□□□ 0.95
Rccd1Q8BTU7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rccd1Q8BTU7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rccd1Q8BTU7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Rccd1Q8BTU7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rccd1Q8BTU7 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.98■□□□□ 0.95
Rccd1Q8BTU7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rccd1Q8BTU7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.98■□□□□ 0.95
Rccd1Q8BTU7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rccd1Q8BTU7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rccd1Q8BTU7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Rccd1Q8BTU7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rccd1Q8BTU7 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.97■□□□□ 0.95
Rccd1Q8BTU7 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rccd1Q8BTU7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rccd1Q8BTU7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rccd1Q8BTU7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Rccd1Q8BTU7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rccd1Q8BTU7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rccd1Q8BTU7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.96■□□□□ 0.95
Rccd1Q8BTU7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rccd1Q8BTU7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rccd1Q8BTU7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rccd1Q8BTU7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rccd1Q8BTU7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.96■□□□□ 0.95
Rccd1Q8BTU7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rccd1Q8BTU7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rccd1Q8BTU7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rccd1Q8BTU7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rccd1Q8BTU7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rccd1Q8BTU7 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rccd1Q8BTU7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rccd1Q8BTU7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rccd1Q8BTU7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rccd1Q8BTU7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rccd1Q8BTU7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rccd1Q8BTU7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rccd1Q8BTU7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rccd1Q8BTU7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rccd1Q8BTU7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rccd1Q8BTU7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rccd1Q8BTU7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Rccd1Q8BTU7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rccd1Q8BTU7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Rccd1Q8BTU7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rccd1Q8BTU7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rccd1Q8BTU7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rccd1Q8BTU7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rccd1Q8BTU7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rccd1Q8BTU7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rccd1Q8BTU7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rccd1Q8BTU7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rccd1Q8BTU7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rccd1Q8BTU7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rccd1Q8BTU7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rccd1Q8BTU7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rccd1Q8BTU7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rccd1Q8BTU7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rccd1Q8BTU7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rccd1Q8BTU7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Rccd1Q8BTU7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rccd1Q8BTU7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Rccd1Q8BTU7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rccd1Q8BTU7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rccd1Q8BTU7 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.91■□□□□ 0.94
Rccd1Q8BTU7 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.91■□□□□ 0.94
Rccd1Q8BTU7 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rccd1Q8BTU7 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rccd1Q8BTU7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rccd1Q8BTU7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rccd1Q8BTU7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rccd1Q8BTU7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rccd1Q8BTU7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Rccd1Q8BTU7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rccd1Q8BTU7 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.9■□□□□ 0.94
Rccd1Q8BTU7 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.9■□□□□ 0.94
Rccd1Q8BTU7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rccd1Q8BTU7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rccd1Q8BTU7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms