Protein–RNA interactions for Protein: Q8BTF7

Lig4, DNA ligase 4, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4Q8BTF7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.89■■□□□ 1.09
Lig4Q8BTF7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lig4Q8BTF7 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lig4Q8BTF7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Lig4Q8BTF7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lig4Q8BTF7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lig4Q8BTF7 Gm9870-201ENSMUST00000063874 645 ntBASIC21.88■■□□□ 1.09
Lig4Q8BTF7 Gm13241-201ENSMUST00000094493 780 ntBASIC21.88■■□□□ 1.09
Lig4Q8BTF7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lig4Q8BTF7 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lig4Q8BTF7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lig4Q8BTF7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Lig4Q8BTF7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lig4Q8BTF7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.87■■□□□ 1.09
Lig4Q8BTF7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
Lig4Q8BTF7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.87■■□□□ 1.09
Lig4Q8BTF7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.87■■□□□ 1.09
Lig4Q8BTF7 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lig4Q8BTF7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Lig4Q8BTF7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Lig4Q8BTF7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Lig4Q8BTF7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.86■■□□□ 1.09
Lig4Q8BTF7 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Lig4Q8BTF7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lig4Q8BTF7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Lig4Q8BTF7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lig4Q8BTF7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Lig4Q8BTF7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lig4Q8BTF7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.85■■□□□ 1.09
Lig4Q8BTF7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.85■■□□□ 1.09
Lig4Q8BTF7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.85■■□□□ 1.09
Lig4Q8BTF7 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Lig4Q8BTF7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.85■■□□□ 1.09
Lig4Q8BTF7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lig4Q8BTF7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Lig4Q8BTF7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lig4Q8BTF7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.84■■□□□ 1.09
Lig4Q8BTF7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lig4Q8BTF7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lig4Q8BTF7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.84■■□□□ 1.09
Lig4Q8BTF7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Lig4Q8BTF7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.84■■□□□ 1.09
Lig4Q8BTF7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.84■■□□□ 1.09
Lig4Q8BTF7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lig4Q8BTF7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lig4Q8BTF7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lig4Q8BTF7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lig4Q8BTF7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lig4Q8BTF7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lig4Q8BTF7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lig4Q8BTF7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lig4Q8BTF7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Lig4Q8BTF7 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
Lig4Q8BTF7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Lig4Q8BTF7 Gm7143-201ENSMUST00000222811 859 ntBASIC21.83■■□□□ 1.09
Lig4Q8BTF7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lig4Q8BTF7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Lig4Q8BTF7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Lig4Q8BTF7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.83■■□□□ 1.08
Lig4Q8BTF7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.83■■□□□ 1.08
Lig4Q8BTF7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lig4Q8BTF7 Golgb1-201ENSMUST00000023534 498 ntBASIC21.82■■□□□ 1.08
Lig4Q8BTF7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lig4Q8BTF7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.82■■□□□ 1.08
Lig4Q8BTF7 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.82■■□□□ 1.08
Lig4Q8BTF7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.82■■□□□ 1.08
Lig4Q8BTF7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Lig4Q8BTF7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
Lig4Q8BTF7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
Lig4Q8BTF7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.81■■□□□ 1.08
Lig4Q8BTF7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lig4Q8BTF7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lig4Q8BTF7 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.81■■□□□ 1.08
Lig4Q8BTF7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lig4Q8BTF7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lig4Q8BTF7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
Lig4Q8BTF7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
Lig4Q8BTF7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lig4Q8BTF7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Lig4Q8BTF7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Lig4Q8BTF7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lig4Q8BTF7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Lig4Q8BTF7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lig4Q8BTF7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lig4Q8BTF7 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.8■■□□□ 1.08
Lig4Q8BTF7 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Lig4Q8BTF7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lig4Q8BTF7 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Lig4Q8BTF7 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.79■■□□□ 1.08
Lig4Q8BTF7 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lig4Q8BTF7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Lig4Q8BTF7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lig4Q8BTF7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lig4Q8BTF7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Lig4Q8BTF7 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lig4Q8BTF7 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lig4Q8BTF7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lig4Q8BTF7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
Lig4Q8BTF7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lig4Q8BTF7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms