Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Suds3Q8BR65 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.05■□□□□ 0.96
Suds3Q8BR65 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Suds3Q8BR65 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Suds3Q8BR65 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Suds3Q8BR65 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.04■□□□□ 0.96
Suds3Q8BR65 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Suds3Q8BR65 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.04■□□□□ 0.96
Suds3Q8BR65 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Suds3Q8BR65 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Suds3Q8BR65 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Suds3Q8BR65 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Suds3Q8BR65 Gm14117-201ENSMUST00000122417 843 ntBASIC21.03■□□□□ 0.96
Suds3Q8BR65 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Suds3Q8BR65 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Suds3Q8BR65 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Suds3Q8BR65 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Suds3Q8BR65 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Suds3Q8BR65 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Suds3Q8BR65 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.02■□□□□ 0.96
Suds3Q8BR65 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Suds3Q8BR65 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Suds3Q8BR65 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.95
Suds3Q8BR65 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Suds3Q8BR65 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Suds3Q8BR65 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Suds3Q8BR65 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Suds3Q8BR65 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Suds3Q8BR65 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.01■□□□□ 0.95
Suds3Q8BR65 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Suds3Q8BR65 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Suds3Q8BR65 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Suds3Q8BR65 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Suds3Q8BR65 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Suds3Q8BR65 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21■□□□□ 0.95
Suds3Q8BR65 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Suds3Q8BR65 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21■□□□□ 0.95
Suds3Q8BR65 Gm9959-201ENSMUST00000068277 390 ntBASIC21■□□□□ 0.95
Suds3Q8BR65 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Suds3Q8BR65 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.99■□□□□ 0.95
Suds3Q8BR65 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Suds3Q8BR65 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Suds3Q8BR65 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Suds3Q8BR65 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.99■□□□□ 0.95
Suds3Q8BR65 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.99■□□□□ 0.95
Suds3Q8BR65 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.99■□□□□ 0.95
Suds3Q8BR65 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Suds3Q8BR65 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Suds3Q8BR65 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Suds3Q8BR65 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Suds3Q8BR65 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Suds3Q8BR65 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Suds3Q8BR65 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Suds3Q8BR65 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Suds3Q8BR65 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.98■□□□□ 0.95
Suds3Q8BR65 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Suds3Q8BR65 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Suds3Q8BR65 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Suds3Q8BR65 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Suds3Q8BR65 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Suds3Q8BR65 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Suds3Q8BR65 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Suds3Q8BR65 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.97■□□□□ 0.95
Suds3Q8BR65 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Suds3Q8BR65 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Suds3Q8BR65 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Suds3Q8BR65 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.97■□□□□ 0.95
Suds3Q8BR65 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Suds3Q8BR65 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Suds3Q8BR65 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.97■□□□□ 0.95
Suds3Q8BR65 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Suds3Q8BR65 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Suds3Q8BR65 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Suds3Q8BR65 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Suds3Q8BR65 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Suds3Q8BR65 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Suds3Q8BR65 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Suds3Q8BR65 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Suds3Q8BR65 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.96■□□□□ 0.95
Suds3Q8BR65 Etf1-202ENSMUST00000180351 108 ntBASIC20.96■□□□□ 0.95
Suds3Q8BR65 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.96■□□□□ 0.95
Suds3Q8BR65 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Suds3Q8BR65 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Suds3Q8BR65 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Suds3Q8BR65 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Suds3Q8BR65 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Suds3Q8BR65 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Suds3Q8BR65 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Suds3Q8BR65 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Suds3Q8BR65 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Suds3Q8BR65 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Suds3Q8BR65 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Suds3Q8BR65 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Suds3Q8BR65 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Suds3Q8BR65 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.94■□□□□ 0.94
Suds3Q8BR65 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Suds3Q8BR65 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Suds3Q8BR65 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Suds3Q8BR65 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Suds3Q8BR65 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms