Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atg4bQ8BGE6 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.49■□□□□ 0.71
Atg4bQ8BGE6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atg4bQ8BGE6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atg4bQ8BGE6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atg4bQ8BGE6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atg4bQ8BGE6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atg4bQ8BGE6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atg4bQ8BGE6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atg4bQ8BGE6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Atg4bQ8BGE6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atg4bQ8BGE6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Atg4bQ8BGE6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.48■□□□□ 0.71
Atg4bQ8BGE6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.48■□□□□ 0.71
Atg4bQ8BGE6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atg4bQ8BGE6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.48■□□□□ 0.71
Atg4bQ8BGE6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.48■□□□□ 0.71
Atg4bQ8BGE6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
Atg4bQ8BGE6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atg4bQ8BGE6 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.47■□□□□ 0.71
Atg4bQ8BGE6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atg4bQ8BGE6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atg4bQ8BGE6 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.47■□□□□ 0.71
Atg4bQ8BGE6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.47■□□□□ 0.71
Atg4bQ8BGE6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atg4bQ8BGE6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Atg4bQ8BGE6 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.47■□□□□ 0.71
Atg4bQ8BGE6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Atg4bQ8BGE6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atg4bQ8BGE6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atg4bQ8BGE6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Atg4bQ8BGE6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atg4bQ8BGE6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.46■□□□□ 0.71
Atg4bQ8BGE6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.45■□□□□ 0.7
Atg4bQ8BGE6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Atg4bQ8BGE6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg4bQ8BGE6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg4bQ8BGE6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg4bQ8BGE6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.45■□□□□ 0.7
Atg4bQ8BGE6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.45■□□□□ 0.7
Atg4bQ8BGE6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg4bQ8BGE6 Gm9959-201ENSMUST00000068277 390 ntBASIC19.45■□□□□ 0.7
Atg4bQ8BGE6 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atg4bQ8BGE6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atg4bQ8BGE6 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Atg4bQ8BGE6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atg4bQ8BGE6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atg4bQ8BGE6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atg4bQ8BGE6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.44■□□□□ 0.7
Atg4bQ8BGE6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
Atg4bQ8BGE6 Etf1-202ENSMUST00000180351 108 ntBASIC19.43■□□□□ 0.7
Atg4bQ8BGE6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atg4bQ8BGE6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Atg4bQ8BGE6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atg4bQ8BGE6 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atg4bQ8BGE6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atg4bQ8BGE6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atg4bQ8BGE6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.42■□□□□ 0.7
Atg4bQ8BGE6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atg4bQ8BGE6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Atg4bQ8BGE6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atg4bQ8BGE6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atg4bQ8BGE6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atg4bQ8BGE6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atg4bQ8BGE6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Atg4bQ8BGE6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.41■□□□□ 0.7
Atg4bQ8BGE6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atg4bQ8BGE6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Atg4bQ8BGE6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atg4bQ8BGE6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Atg4bQ8BGE6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atg4bQ8BGE6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atg4bQ8BGE6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atg4bQ8BGE6 Gm7417-201ENSMUST00000192950 473 ntBASIC19.4■□□□□ 0.7
Atg4bQ8BGE6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.4■□□□□ 0.7
Atg4bQ8BGE6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Atg4bQ8BGE6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atg4bQ8BGE6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.4■□□□□ 0.7
Atg4bQ8BGE6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atg4bQ8BGE6 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.39■□□□□ 0.7
Atg4bQ8BGE6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atg4bQ8BGE6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Atg4bQ8BGE6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Atg4bQ8BGE6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.39■□□□□ 0.69
Atg4bQ8BGE6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atg4bQ8BGE6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Atg4bQ8BGE6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atg4bQ8BGE6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.39■□□□□ 0.69
Atg4bQ8BGE6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atg4bQ8BGE6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.38■□□□□ 0.69
Atg4bQ8BGE6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atg4bQ8BGE6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atg4bQ8BGE6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atg4bQ8BGE6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atg4bQ8BGE6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Atg4bQ8BGE6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atg4bQ8BGE6 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.37■□□□□ 0.69
Atg4bQ8BGE6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Atg4bQ8BGE6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atg4bQ8BGE6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms