Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Gm9847-201ENSMUST00000052528 599 ntBASIC20.15■□□□□ 0.82
Lrrtm4Q80XG9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrrtm4Q80XG9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
Lrrtm4Q80XG9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.15■□□□□ 0.82
Lrrtm4Q80XG9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Lrrtm4Q80XG9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrrtm4Q80XG9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Lrrtm4Q80XG9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Lrrtm4Q80XG9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lrrtm4Q80XG9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lrrtm4Q80XG9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Lrrtm4Q80XG9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Lrrtm4Q80XG9 Gm9870-201ENSMUST00000063874 645 ntBASIC20.14■□□□□ 0.81
Lrrtm4Q80XG9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrrtm4Q80XG9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lrrtm4Q80XG9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.13■□□□□ 0.81
Lrrtm4Q80XG9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Lrrtm4Q80XG9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrrtm4Q80XG9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lrrtm4Q80XG9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.13■□□□□ 0.81
Lrrtm4Q80XG9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.13■□□□□ 0.81
Lrrtm4Q80XG9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.13■□□□□ 0.81
Lrrtm4Q80XG9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Lrrtm4Q80XG9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.13■□□□□ 0.81
Lrrtm4Q80XG9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.13■□□□□ 0.81
Lrrtm4Q80XG9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrrtm4Q80XG9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrrtm4Q80XG9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.13■□□□□ 0.81
Lrrtm4Q80XG9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Lrrtm4Q80XG9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrrtm4Q80XG9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrrtm4Q80XG9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.12■□□□□ 0.81
Lrrtm4Q80XG9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrrtm4Q80XG9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrrtm4Q80XG9 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.11■□□□□ 0.81
Lrrtm4Q80XG9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lrrtm4Q80XG9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lrrtm4Q80XG9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.11■□□□□ 0.81
Lrrtm4Q80XG9 Gm7143-201ENSMUST00000222811 859 ntBASIC20.11■□□□□ 0.81
Lrrtm4Q80XG9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Lrrtm4Q80XG9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lrrtm4Q80XG9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lrrtm4Q80XG9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lrrtm4Q80XG9 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.1■□□□□ 0.81
Lrrtm4Q80XG9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.1■□□□□ 0.81
Lrrtm4Q80XG9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Lrrtm4Q80XG9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lrrtm4Q80XG9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lrrtm4Q80XG9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.1■□□□□ 0.81
Lrrtm4Q80XG9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lrrtm4Q80XG9 Gm13241-201ENSMUST00000094493 780 ntBASIC20.1■□□□□ 0.81
Lrrtm4Q80XG9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lrrtm4Q80XG9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lrrtm4Q80XG9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lrrtm4Q80XG9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lrrtm4Q80XG9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lrrtm4Q80XG9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lrrtm4Q80XG9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lrrtm4Q80XG9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lrrtm4Q80XG9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.09■□□□□ 0.81
Lrrtm4Q80XG9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.09■□□□□ 0.81
Lrrtm4Q80XG9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.09■□□□□ 0.81
Lrrtm4Q80XG9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lrrtm4Q80XG9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Lrrtm4Q80XG9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lrrtm4Q80XG9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lrrtm4Q80XG9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lrrtm4Q80XG9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lrrtm4Q80XG9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Lrrtm4Q80XG9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.08■□□□□ 0.81
Lrrtm4Q80XG9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lrrtm4Q80XG9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Lrrtm4Q80XG9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
Lrrtm4Q80XG9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lrrtm4Q80XG9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lrrtm4Q80XG9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Lrrtm4Q80XG9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Lrrtm4Q80XG9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.07■□□□□ 0.8
Lrrtm4Q80XG9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
Lrrtm4Q80XG9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lrrtm4Q80XG9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lrrtm4Q80XG9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lrrtm4Q80XG9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lrrtm4Q80XG9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lrrtm4Q80XG9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Lrrtm4Q80XG9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Lrrtm4Q80XG9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.06■□□□□ 0.8
Lrrtm4Q80XG9 Golgb1-201ENSMUST00000023534 498 ntBASIC20.06■□□□□ 0.8
Lrrtm4Q80XG9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lrrtm4Q80XG9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lrrtm4Q80XG9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lrrtm4Q80XG9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lrrtm4Q80XG9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lrrtm4Q80XG9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lrrtm4Q80XG9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Lrrtm4Q80XG9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lrrtm4Q80XG9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Lrrtm4Q80XG9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
Lrrtm4Q80XG9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lrrtm4Q80XG9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms