Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim45Q6PFY8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim45Q6PFY8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.46■□□□□ 0.71
Trim45Q6PFY8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.46■□□□□ 0.71
Trim45Q6PFY8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.46■□□□□ 0.71
Trim45Q6PFY8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Trim45Q6PFY8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim45Q6PFY8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim45Q6PFY8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Trim45Q6PFY8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Trim45Q6PFY8 Gm7417-201ENSMUST00000192950 473 ntBASIC19.45■□□□□ 0.7
Trim45Q6PFY8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.45■□□□□ 0.7
Trim45Q6PFY8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim45Q6PFY8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim45Q6PFY8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim45Q6PFY8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim45Q6PFY8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim45Q6PFY8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim45Q6PFY8 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim45Q6PFY8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trim45Q6PFY8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim45Q6PFY8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim45Q6PFY8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim45Q6PFY8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.44■□□□□ 0.7
Trim45Q6PFY8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.44■□□□□ 0.7
Trim45Q6PFY8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trim45Q6PFY8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim45Q6PFY8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim45Q6PFY8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim45Q6PFY8 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.43■□□□□ 0.7
Trim45Q6PFY8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trim45Q6PFY8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trim45Q6PFY8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim45Q6PFY8 Gm10399-202ENSMUST00000202768 748 ntBASIC19.43■□□□□ 0.7
Trim45Q6PFY8 Gm40881-201ENSMUST00000223397 166 ntBASIC19.43■□□□□ 0.7
Trim45Q6PFY8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim45Q6PFY8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim45Q6PFY8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim45Q6PFY8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim45Q6PFY8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim45Q6PFY8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.42■□□□□ 0.7
Trim45Q6PFY8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.42■□□□□ 0.7
Trim45Q6PFY8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.42■□□□□ 0.7
Trim45Q6PFY8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim45Q6PFY8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim45Q6PFY8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim45Q6PFY8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim45Q6PFY8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim45Q6PFY8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim45Q6PFY8 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.4■□□□□ 0.7
Trim45Q6PFY8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trim45Q6PFY8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.4■□□□□ 0.7
Trim45Q6PFY8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim45Q6PFY8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim45Q6PFY8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim45Q6PFY8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim45Q6PFY8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Trim45Q6PFY8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.39■□□□□ 0.7
Trim45Q6PFY8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim45Q6PFY8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim45Q6PFY8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim45Q6PFY8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.39■□□□□ 0.69
Trim45Q6PFY8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.39■□□□□ 0.69
Trim45Q6PFY8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim45Q6PFY8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Trim45Q6PFY8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim45Q6PFY8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim45Q6PFY8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim45Q6PFY8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim45Q6PFY8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim45Q6PFY8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim45Q6PFY8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim45Q6PFY8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim45Q6PFY8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim45Q6PFY8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim45Q6PFY8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim45Q6PFY8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim45Q6PFY8 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim45Q6PFY8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim45Q6PFY8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim45Q6PFY8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim45Q6PFY8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Trim45Q6PFY8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trim45Q6PFY8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim45Q6PFY8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim45Q6PFY8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim45Q6PFY8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim45Q6PFY8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim45Q6PFY8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.36■□□□□ 0.69
Trim45Q6PFY8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.36■□□□□ 0.69
Trim45Q6PFY8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim45Q6PFY8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim45Q6PFY8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim45Q6PFY8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim45Q6PFY8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim45Q6PFY8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.35■□□□□ 0.69
Trim45Q6PFY8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.35■□□□□ 0.69
Trim45Q6PFY8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim45Q6PFY8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim45Q6PFY8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms