Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gm5786-201ENSMUST00000085368 882 ntBASIC18.87■□□□□ 0.61
Smarcd3Q6P9Z1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcd3Q6P9Z1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcd3Q6P9Z1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcd3Q6P9Z1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Smarcd3Q6P9Z1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcd3Q6P9Z1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcd3Q6P9Z1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcd3Q6P9Z1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.86■□□□□ 0.61
Smarcd3Q6P9Z1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcd3Q6P9Z1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcd3Q6P9Z1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcd3Q6P9Z1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcd3Q6P9Z1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcd3Q6P9Z1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcd3Q6P9Z1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcd3Q6P9Z1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcd3Q6P9Z1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd3Q6P9Z1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd3Q6P9Z1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd3Q6P9Z1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd3Q6P9Z1 Gm10420-201ENSMUST00000121713 882 ntBASIC18.85■□□□□ 0.61
Smarcd3Q6P9Z1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd3Q6P9Z1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.84■□□□□ 0.61
Smarcd3Q6P9Z1 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.84■□□□□ 0.61
Smarcd3Q6P9Z1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcd3Q6P9Z1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcd3Q6P9Z1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcd3Q6P9Z1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcd3Q6P9Z1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcd3Q6P9Z1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Smarcd3Q6P9Z1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Smarcd3Q6P9Z1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcd3Q6P9Z1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcd3Q6P9Z1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcd3Q6P9Z1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcd3Q6P9Z1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcd3Q6P9Z1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcd3Q6P9Z1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcd3Q6P9Z1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcd3Q6P9Z1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcd3Q6P9Z1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcd3Q6P9Z1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcd3Q6P9Z1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Smarcd3Q6P9Z1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcd3Q6P9Z1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Smarcd3Q6P9Z1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Smarcd3Q6P9Z1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcd3Q6P9Z1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcd3Q6P9Z1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcd3Q6P9Z1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcd3Q6P9Z1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcd3Q6P9Z1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcd3Q6P9Z1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.8■□□□□ 0.6
Smarcd3Q6P9Z1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Smarcd3Q6P9Z1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcd3Q6P9Z1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcd3Q6P9Z1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcd3Q6P9Z1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcd3Q6P9Z1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcd3Q6P9Z1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcd3Q6P9Z1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcd3Q6P9Z1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.79■□□□□ 0.6
Smarcd3Q6P9Z1 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Smarcd3Q6P9Z1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Smarcd3Q6P9Z1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcd3Q6P9Z1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Smarcd3Q6P9Z1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcd3Q6P9Z1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcd3Q6P9Z1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcd3Q6P9Z1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Smarcd3Q6P9Z1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.78■□□□□ 0.6
Smarcd3Q6P9Z1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Smarcd3Q6P9Z1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Smarcd3Q6P9Z1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcd3Q6P9Z1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcd3Q6P9Z1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcd3Q6P9Z1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcd3Q6P9Z1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcd3Q6P9Z1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcd3Q6P9Z1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcd3Q6P9Z1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcd3Q6P9Z1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcd3Q6P9Z1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcd3Q6P9Z1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcd3Q6P9Z1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcd3Q6P9Z1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smarcd3Q6P9Z1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smarcd3Q6P9Z1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Smarcd3Q6P9Z1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Smarcd3Q6P9Z1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcd3Q6P9Z1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Smarcd3Q6P9Z1 Cap2-205ENSMUST00000225824 1634 ntBASIC18.76■□□□□ 0.59
Smarcd3Q6P9Z1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.76■□□□□ 0.59
Smarcd3Q6P9Z1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcd3Q6P9Z1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcd3Q6P9Z1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcd3Q6P9Z1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcd3Q6P9Z1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcd3Q6P9Z1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms