Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sp140Q6NSQ5 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sp140Q6NSQ5 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sp140Q6NSQ5 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sp140Q6NSQ5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
Sp140Q6NSQ5 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sp140Q6NSQ5 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.99■□□□□ 0.95
Sp140Q6NSQ5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sp140Q6NSQ5 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.98■□□□□ 0.95
Sp140Q6NSQ5 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sp140Q6NSQ5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sp140Q6NSQ5 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Sp140Q6NSQ5 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sp140Q6NSQ5 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sp140Q6NSQ5 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.97■□□□□ 0.95
Sp140Q6NSQ5 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.97■□□□□ 0.95
Sp140Q6NSQ5 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sp140Q6NSQ5 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sp140Q6NSQ5 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sp140Q6NSQ5 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.97■□□□□ 0.95
Sp140Q6NSQ5 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Sp140Q6NSQ5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sp140Q6NSQ5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Sp140Q6NSQ5 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sp140Q6NSQ5 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sp140Q6NSQ5 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sp140Q6NSQ5 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.96■□□□□ 0.95
Sp140Q6NSQ5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sp140Q6NSQ5 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sp140Q6NSQ5 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Sp140Q6NSQ5 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.96■□□□□ 0.95
Sp140Q6NSQ5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sp140Q6NSQ5 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sp140Q6NSQ5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sp140Q6NSQ5 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sp140Q6NSQ5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.95■□□□□ 0.94
Sp140Q6NSQ5 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Sp140Q6NSQ5 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sp140Q6NSQ5 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sp140Q6NSQ5 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sp140Q6NSQ5 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sp140Q6NSQ5 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sp140Q6NSQ5 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
Sp140Q6NSQ5 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sp140Q6NSQ5 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sp140Q6NSQ5 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sp140Q6NSQ5 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sp140Q6NSQ5 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sp140Q6NSQ5 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sp140Q6NSQ5 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sp140Q6NSQ5 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.92■□□□□ 0.94
Sp140Q6NSQ5 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Sp140Q6NSQ5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sp140Q6NSQ5 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.92■□□□□ 0.94
Sp140Q6NSQ5 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Sp140Q6NSQ5 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sp140Q6NSQ5 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sp140Q6NSQ5 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.91■□□□□ 0.94
Sp140Q6NSQ5 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sp140Q6NSQ5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Sp140Q6NSQ5 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sp140Q6NSQ5 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sp140Q6NSQ5 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sp140Q6NSQ5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sp140Q6NSQ5 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
Sp140Q6NSQ5 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sp140Q6NSQ5 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Sp140Q6NSQ5 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sp140Q6NSQ5 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sp140Q6NSQ5 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sp140Q6NSQ5 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sp140Q6NSQ5 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Sp140Q6NSQ5 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sp140Q6NSQ5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sp140Q6NSQ5 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.89■□□□□ 0.93
Sp140Q6NSQ5 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sp140Q6NSQ5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Sp140Q6NSQ5 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sp140Q6NSQ5 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sp140Q6NSQ5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sp140Q6NSQ5 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sp140Q6NSQ5 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sp140Q6NSQ5 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sp140Q6NSQ5 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sp140Q6NSQ5 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sp140Q6NSQ5 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sp140Q6NSQ5 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Sp140Q6NSQ5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.88■□□□□ 0.93
Sp140Q6NSQ5 Gm10232-201ENSMUST00000089221 720 ntBASIC20.88■□□□□ 0.93
Sp140Q6NSQ5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.88■□□□□ 0.93
Sp140Q6NSQ5 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sp140Q6NSQ5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sp140Q6NSQ5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sp140Q6NSQ5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sp140Q6NSQ5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Sp140Q6NSQ5 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Sp140Q6NSQ5 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sp140Q6NSQ5 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.87■□□□□ 0.93
Sp140Q6NSQ5 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sp140Q6NSQ5 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 116.1 ms