Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ParpbpQ6IRT3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.31■□□□□ 0.68
ParpbpQ6IRT3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ParpbpQ6IRT3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.31■□□□□ 0.68
ParpbpQ6IRT3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ParpbpQ6IRT3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ParpbpQ6IRT3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ParpbpQ6IRT3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ParpbpQ6IRT3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.3■□□□□ 0.68
ParpbpQ6IRT3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ParpbpQ6IRT3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ParpbpQ6IRT3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ParpbpQ6IRT3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ParpbpQ6IRT3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ParpbpQ6IRT3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
ParpbpQ6IRT3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ParpbpQ6IRT3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.29■□□□□ 0.68
ParpbpQ6IRT3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ParpbpQ6IRT3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ParpbpQ6IRT3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ParpbpQ6IRT3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.29■□□□□ 0.68
ParpbpQ6IRT3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ParpbpQ6IRT3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ParpbpQ6IRT3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ParpbpQ6IRT3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.28■□□□□ 0.68
ParpbpQ6IRT3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.28■□□□□ 0.68
ParpbpQ6IRT3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
ParpbpQ6IRT3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ParpbpQ6IRT3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ParpbpQ6IRT3 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.28■□□□□ 0.68
ParpbpQ6IRT3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ParpbpQ6IRT3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ParpbpQ6IRT3 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.27■□□□□ 0.68
ParpbpQ6IRT3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ParpbpQ6IRT3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
ParpbpQ6IRT3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.27■□□□□ 0.68
ParpbpQ6IRT3 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.27■□□□□ 0.68
ParpbpQ6IRT3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ParpbpQ6IRT3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
ParpbpQ6IRT3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ParpbpQ6IRT3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ParpbpQ6IRT3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
ParpbpQ6IRT3 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.27■□□□□ 0.67
ParpbpQ6IRT3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ParpbpQ6IRT3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ParpbpQ6IRT3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ParpbpQ6IRT3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ParpbpQ6IRT3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ParpbpQ6IRT3 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.26■□□□□ 0.67
ParpbpQ6IRT3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ParpbpQ6IRT3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ParpbpQ6IRT3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ParpbpQ6IRT3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ParpbpQ6IRT3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ParpbpQ6IRT3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ParpbpQ6IRT3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ParpbpQ6IRT3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ParpbpQ6IRT3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ParpbpQ6IRT3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ParpbpQ6IRT3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.25■□□□□ 0.67
ParpbpQ6IRT3 Gm10399-202ENSMUST00000202768 748 ntBASIC19.25■□□□□ 0.67
ParpbpQ6IRT3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ParpbpQ6IRT3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ParpbpQ6IRT3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ParpbpQ6IRT3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ParpbpQ6IRT3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ParpbpQ6IRT3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ParpbpQ6IRT3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ParpbpQ6IRT3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.24■□□□□ 0.67
ParpbpQ6IRT3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ParpbpQ6IRT3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ParpbpQ6IRT3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ParpbpQ6IRT3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ParpbpQ6IRT3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ParpbpQ6IRT3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.24■□□□□ 0.67
ParpbpQ6IRT3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ParpbpQ6IRT3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ParpbpQ6IRT3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ParpbpQ6IRT3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ParpbpQ6IRT3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ParpbpQ6IRT3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ParpbpQ6IRT3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ParpbpQ6IRT3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ParpbpQ6IRT3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ParpbpQ6IRT3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ParpbpQ6IRT3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.23■□□□□ 0.67
ParpbpQ6IRT3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ParpbpQ6IRT3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
ParpbpQ6IRT3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ParpbpQ6IRT3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ParpbpQ6IRT3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ParpbpQ6IRT3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ParpbpQ6IRT3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ParpbpQ6IRT3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ParpbpQ6IRT3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.22■□□□□ 0.67
ParpbpQ6IRT3 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.22■□□□□ 0.67
ParpbpQ6IRT3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
ParpbpQ6IRT3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ParpbpQ6IRT3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ParpbpQ6IRT3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms