Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Ptch1Q61115 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC30.66■■■□□ 2.5
Ptch1Q61115 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC30.66■■■□□ 2.5
Ptch1Q61115 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Ptch1Q61115 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
Ptch1Q61115 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Ptch1Q61115 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Ptch1Q61115 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC30.66■■■□□ 2.5
Ptch1Q61115 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Ptch1Q61115 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Ptch1Q61115 AC166356.1-201ENSMUST00000228236 1426 ntBASIC30.65■■■□□ 2.5
Ptch1Q61115 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC30.64■■■□□ 2.5
Ptch1Q61115 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC30.64■■■□□ 2.5
Ptch1Q61115 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Ptch1Q61115 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
Ptch1Q61115 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Ptch1Q61115 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
Ptch1Q61115 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Ptch1Q61115 AV356131-201ENSMUST00000206201 750 ntBASIC30.64■■■□□ 2.49
Ptch1Q61115 Gm18671-201ENSMUST00000214826 683 ntBASIC30.64■■■□□ 2.49
Ptch1Q61115 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC30.64■■■□□ 2.49
Ptch1Q61115 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
Ptch1Q61115 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC30.63■■■□□ 2.49
Ptch1Q61115 Smad6-203ENSMUST00000179458 273 ntBASIC30.63■■■□□ 2.49
Ptch1Q61115 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC30.63■■■□□ 2.49
Ptch1Q61115 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
Ptch1Q61115 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC30.62■■■□□ 2.49
Ptch1Q61115 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Ptch1Q61115 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
Ptch1Q61115 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ptch1Q61115 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Ptch1Q61115 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Ptch1Q61115 Gm43530-201ENSMUST00000195920 274 ntBASIC30.61■■■□□ 2.49
Ptch1Q61115 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC30.61■■■□□ 2.49
Ptch1Q61115 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
Ptch1Q61115 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Ptch1Q61115 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Ptch1Q61115 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC30.61■■■□□ 2.49
Ptch1Q61115 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC30.61■■■□□ 2.49
Ptch1Q61115 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
Ptch1Q61115 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
Ptch1Q61115 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC30.6■■■□□ 2.49
Ptch1Q61115 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Ptch1Q61115 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
Ptch1Q61115 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
Ptch1Q61115 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Ptch1Q61115 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC30.59■■■□□ 2.49
Ptch1Q61115 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Ptch1Q61115 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC30.59■■■□□ 2.49
Ptch1Q61115 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Ptch1Q61115 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Ptch1Q61115 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Ptch1Q61115 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Ptch1Q61115 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
Ptch1Q61115 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Ptch1Q61115 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Ptch1Q61115 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Ptch1Q61115 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC30.56■■■□□ 2.48
Ptch1Q61115 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
Ptch1Q61115 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
Ptch1Q61115 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Ptch1Q61115 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Ptch1Q61115 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Ptch1Q61115 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Ptch1Q61115 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC30.55■■■□□ 2.48
Ptch1Q61115 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC30.55■■■□□ 2.48
Ptch1Q61115 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC30.55■■■□□ 2.48
Ptch1Q61115 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Ptch1Q61115 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Ptch1Q61115 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Ptch1Q61115 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC30.53■■■□□ 2.48
Ptch1Q61115 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Ptch1Q61115 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC30.53■■■□□ 2.48
Ptch1Q61115 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC30.53■■■□□ 2.48
Ptch1Q61115 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Ptch1Q61115 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
Ptch1Q61115 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Ptch1Q61115 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC30.51■■■□□ 2.47
Ptch1Q61115 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Ptch1Q61115 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.47
Ptch1Q61115 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
Ptch1Q61115 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Ptch1Q61115 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Ptch1Q61115 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
Ptch1Q61115 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
Ptch1Q61115 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Ptch1Q61115 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Ptch1Q61115 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
Ptch1Q61115 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
Ptch1Q61115 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC30.49■■■□□ 2.47
Ptch1Q61115 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC30.49■■■□□ 2.47
Ptch1Q61115 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Ptch1Q61115 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Ptch1Q61115 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
Ptch1Q61115 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC30.48■■■□□ 2.47
Ptch1Q61115 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Ptch1Q61115 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Ptch1Q61115 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Ptch1Q61115 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Ptch1Q61115 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC30.48■■■□□ 2.47
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms