Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ClpbQ60649 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ClpbQ60649 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ClpbQ60649 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ClpbQ60649 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.77■□□□□ 0.76
ClpbQ60649 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ClpbQ60649 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ClpbQ60649 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.77■□□□□ 0.76
ClpbQ60649 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ClpbQ60649 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
ClpbQ60649 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ClpbQ60649 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
ClpbQ60649 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ClpbQ60649 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.76■□□□□ 0.75
ClpbQ60649 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ClpbQ60649 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ClpbQ60649 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
ClpbQ60649 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ClpbQ60649 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ClpbQ60649 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ClpbQ60649 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ClpbQ60649 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.75■□□□□ 0.75
ClpbQ60649 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ClpbQ60649 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.75■□□□□ 0.75
ClpbQ60649 Gm40881-201ENSMUST00000223397 166 ntBASIC19.75■□□□□ 0.75
ClpbQ60649 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ClpbQ60649 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ClpbQ60649 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.74■□□□□ 0.75
ClpbQ60649 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
ClpbQ60649 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ClpbQ60649 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.74■□□□□ 0.75
ClpbQ60649 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ClpbQ60649 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ClpbQ60649 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ClpbQ60649 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ClpbQ60649 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ClpbQ60649 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ClpbQ60649 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ClpbQ60649 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.73■□□□□ 0.75
ClpbQ60649 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ClpbQ60649 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ClpbQ60649 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.73■□□□□ 0.75
ClpbQ60649 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.73■□□□□ 0.75
ClpbQ60649 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ClpbQ60649 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.73■□□□□ 0.75
ClpbQ60649 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ClpbQ60649 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ClpbQ60649 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ClpbQ60649 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ClpbQ60649 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ClpbQ60649 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ClpbQ60649 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ClpbQ60649 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.72■□□□□ 0.75
ClpbQ60649 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
ClpbQ60649 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
ClpbQ60649 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.71■□□□□ 0.75
ClpbQ60649 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ClpbQ60649 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
ClpbQ60649 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ClpbQ60649 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.71■□□□□ 0.75
ClpbQ60649 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.71■□□□□ 0.75
ClpbQ60649 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ClpbQ60649 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ClpbQ60649 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ClpbQ60649 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ClpbQ60649 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ClpbQ60649 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.7■□□□□ 0.74
ClpbQ60649 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ClpbQ60649 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ClpbQ60649 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ClpbQ60649 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ClpbQ60649 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.69■□□□□ 0.74
ClpbQ60649 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ClpbQ60649 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ClpbQ60649 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ClpbQ60649 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ClpbQ60649 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.69■□□□□ 0.74
ClpbQ60649 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ClpbQ60649 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ClpbQ60649 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ClpbQ60649 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ClpbQ60649 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ClpbQ60649 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ClpbQ60649 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ClpbQ60649 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ClpbQ60649 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ClpbQ60649 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ClpbQ60649 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.67■□□□□ 0.74
ClpbQ60649 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.67■□□□□ 0.74
ClpbQ60649 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ClpbQ60649 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.67■□□□□ 0.74
ClpbQ60649 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
ClpbQ60649 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ClpbQ60649 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ClpbQ60649 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ClpbQ60649 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.66■□□□□ 0.74
ClpbQ60649 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ClpbQ60649 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ClpbQ60649 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ClpbQ60649 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 240.1 ms