Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nr1h4Q60641 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Nr1h4Q60641 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.6■□□□□ 0.73
Nr1h4Q60641 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1h4Q60641 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Nr1h4Q60641 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1h4Q60641 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1h4Q60641 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1h4Q60641 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1h4Q60641 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1h4Q60641 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1h4Q60641 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1h4Q60641 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1h4Q60641 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.59■□□□□ 0.73
Nr1h4Q60641 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1h4Q60641 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1h4Q60641 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1h4Q60641 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.59■□□□□ 0.73
Nr1h4Q60641 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1h4Q60641 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1h4Q60641 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1h4Q60641 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1h4Q60641 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1h4Q60641 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nr1h4Q60641 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.73
Nr1h4Q60641 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nr1h4Q60641 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nr1h4Q60641 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.58■□□□□ 0.73
Nr1h4Q60641 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Nr1h4Q60641 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nr1h4Q60641 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.57■□□□□ 0.72
Nr1h4Q60641 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nr1h4Q60641 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nr1h4Q60641 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.57■□□□□ 0.72
Nr1h4Q60641 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nr1h4Q60641 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.57■□□□□ 0.72
Nr1h4Q60641 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nr1h4Q60641 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nr1h4Q60641 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nr1h4Q60641 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Nr1h4Q60641 Gm14523-201ENSMUST00000117260 558 ntBASIC19.56■□□□□ 0.72
Nr1h4Q60641 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.56■□□□□ 0.72
Nr1h4Q60641 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Nr1h4Q60641 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nr1h4Q60641 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1h4Q60641 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1h4Q60641 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1h4Q60641 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.55■□□□□ 0.72
Nr1h4Q60641 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1h4Q60641 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1h4Q60641 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1h4Q60641 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Nr1h4Q60641 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1h4Q60641 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1h4Q60641 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1h4Q60641 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1h4Q60641 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Nr1h4Q60641 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nr1h4Q60641 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.54■□□□□ 0.72
Nr1h4Q60641 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nr1h4Q60641 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nr1h4Q60641 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nr1h4Q60641 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nr1h4Q60641 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nr1h4Q60641 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nr1h4Q60641 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nr1h4Q60641 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nr1h4Q60641 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nr1h4Q60641 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nr1h4Q60641 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nr1h4Q60641 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.53■□□□□ 0.72
Nr1h4Q60641 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Nr1h4Q60641 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nr1h4Q60641 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nr1h4Q60641 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Nr1h4Q60641 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Nr1h4Q60641 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nr1h4Q60641 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Nr1h4Q60641 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nr1h4Q60641 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.52■□□□□ 0.72
Nr1h4Q60641 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nr1h4Q60641 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Nr1h4Q60641 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.51■□□□□ 0.71
Nr1h4Q60641 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1h4Q60641 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1h4Q60641 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Nr1h4Q60641 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1h4Q60641 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1h4Q60641 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1h4Q60641 Gm27502-201ENSMUST00000183495 199 ntBASIC19.51■□□□□ 0.71
Nr1h4Q60641 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1h4Q60641 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Nr1h4Q60641 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Nr1h4Q60641 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1h4Q60641 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1h4Q60641 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1h4Q60641 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1h4Q60641 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Nr1h4Q60641 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nr1h4Q60641 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms