Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Trav5d-4Q5R1F6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav5d-4Q5R1F6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
Trav5d-4Q5R1F6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav5d-4Q5R1F6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav5d-4Q5R1F6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.75■□□□□ 0.43
Trav5d-4Q5R1F6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav5d-4Q5R1F6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav5d-4Q5R1F6 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.75■□□□□ 0.43
Trav5d-4Q5R1F6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav5d-4Q5R1F6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.75■□□□□ 0.43
Trav5d-4Q5R1F6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav5d-4Q5R1F6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav5d-4Q5R1F6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trav5d-4Q5R1F6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trav5d-4Q5R1F6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Trav5d-4Q5R1F6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav5d-4Q5R1F6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav5d-4Q5R1F6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trav5d-4Q5R1F6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav5d-4Q5R1F6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav5d-4Q5R1F6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trav5d-4Q5R1F6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav5d-4Q5R1F6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav5d-4Q5R1F6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.74■□□□□ 0.43
Trav5d-4Q5R1F6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav5d-4Q5R1F6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav5d-4Q5R1F6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav5d-4Q5R1F6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav5d-4Q5R1F6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trav5d-4Q5R1F6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trav5d-4Q5R1F6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trav5d-4Q5R1F6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav5d-4Q5R1F6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trav5d-4Q5R1F6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav5d-4Q5R1F6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav5d-4Q5R1F6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav5d-4Q5R1F6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav5d-4Q5R1F6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.72■□□□□ 0.43
Trav5d-4Q5R1F6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav5d-4Q5R1F6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Trav5d-4Q5R1F6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav5d-4Q5R1F6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trav5d-4Q5R1F6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav5d-4Q5R1F6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav5d-4Q5R1F6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trav5d-4Q5R1F6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Trav5d-4Q5R1F6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav5d-4Q5R1F6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav5d-4Q5R1F6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav5d-4Q5R1F6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav5d-4Q5R1F6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trav5d-4Q5R1F6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav5d-4Q5R1F6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.71■□□□□ 0.43
Trav5d-4Q5R1F6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav5d-4Q5R1F6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav5d-4Q5R1F6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav5d-4Q5R1F6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav5d-4Q5R1F6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav5d-4Q5R1F6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trav5d-4Q5R1F6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav5d-4Q5R1F6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Trav5d-4Q5R1F6 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.69■□□□□ 0.42
Trav5d-4Q5R1F6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trav5d-4Q5R1F6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav5d-4Q5R1F6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav5d-4Q5R1F6 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav5d-4Q5R1F6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav5d-4Q5R1F6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav5d-4Q5R1F6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav5d-4Q5R1F6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav5d-4Q5R1F6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav5d-4Q5R1F6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Trav5d-4Q5R1F6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav5d-4Q5R1F6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav5d-4Q5R1F6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trav5d-4Q5R1F6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav5d-4Q5R1F6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav5d-4Q5R1F6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav5d-4Q5R1F6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav5d-4Q5R1F6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav5d-4Q5R1F6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav5d-4Q5R1F6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.67■□□□□ 0.42
Trav5d-4Q5R1F6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav5d-4Q5R1F6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav5d-4Q5R1F6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav5d-4Q5R1F6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav5d-4Q5R1F6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav5d-4Q5R1F6 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav5d-4Q5R1F6 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav5d-4Q5R1F6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav5d-4Q5R1F6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav5d-4Q5R1F6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav5d-4Q5R1F6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trav5d-4Q5R1F6 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.66■□□□□ 0.42
Trav5d-4Q5R1F6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav5d-4Q5R1F6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav5d-4Q5R1F6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav5d-4Q5R1F6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav5d-4Q5R1F6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms