Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
Trpm1Q2TV84 AC112142.1-201ENSMUST00000228796 918 ntBASIC30.32■■■□□ 2.44
Trpm1Q2TV84 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
Trpm1Q2TV84 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
Trpm1Q2TV84 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC30.3■■■□□ 2.44
Trpm1Q2TV84 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Trpm1Q2TV84 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Trpm1Q2TV84 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Trpm1Q2TV84 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
Trpm1Q2TV84 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Trpm1Q2TV84 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Trpm1Q2TV84 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC30.29■■■□□ 2.44
Trpm1Q2TV84 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC30.28■■■□□ 2.44
Trpm1Q2TV84 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC30.28■■■□□ 2.44
Trpm1Q2TV84 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Trpm1Q2TV84 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Trpm1Q2TV84 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
Trpm1Q2TV84 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Trpm1Q2TV84 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC30.27■■■□□ 2.44
Trpm1Q2TV84 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Trpm1Q2TV84 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Trpm1Q2TV84 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
Trpm1Q2TV84 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.43
Trpm1Q2TV84 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Trpm1Q2TV84 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC30.25■■■□□ 2.43
Trpm1Q2TV84 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Trpm1Q2TV84 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
Trpm1Q2TV84 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
Trpm1Q2TV84 Smad6-203ENSMUST00000179458 273 ntBASIC30.24■■■□□ 2.43
Trpm1Q2TV84 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Trpm1Q2TV84 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Trpm1Q2TV84 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Trpm1Q2TV84 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Trpm1Q2TV84 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Trpm1Q2TV84 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Trpm1Q2TV84 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Trpm1Q2TV84 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC30.22■■■□□ 2.43
Trpm1Q2TV84 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
Trpm1Q2TV84 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC30.22■■■□□ 2.43
Trpm1Q2TV84 AC166356.1-201ENSMUST00000228236 1426 ntBASIC30.22■■■□□ 2.43
Trpm1Q2TV84 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
Trpm1Q2TV84 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Trpm1Q2TV84 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
Trpm1Q2TV84 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Trpm1Q2TV84 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Trpm1Q2TV84 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Trpm1Q2TV84 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Trpm1Q2TV84 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Trpm1Q2TV84 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
Trpm1Q2TV84 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
Trpm1Q2TV84 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Trpm1Q2TV84 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Trpm1Q2TV84 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Trpm1Q2TV84 Gm42642-201ENSMUST00000200683 355 ntBASIC30.19■■■□□ 2.42
Trpm1Q2TV84 Gm12669-201ENSMUST00000122162 1009 ntBASIC30.18■■■□□ 2.42
Trpm1Q2TV84 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC30.18■■■□□ 2.42
Trpm1Q2TV84 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC30.18■■■□□ 2.42
Trpm1Q2TV84 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Trpm1Q2TV84 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Trpm1Q2TV84 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Trpm1Q2TV84 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
Trpm1Q2TV84 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Trpm1Q2TV84 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC30.17■■■□□ 2.42
Trpm1Q2TV84 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
Trpm1Q2TV84 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Trpm1Q2TV84 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
Trpm1Q2TV84 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC30.16■■■□□ 2.42
Trpm1Q2TV84 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Trpm1Q2TV84 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC30.15■■■□□ 2.42
Trpm1Q2TV84 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC30.15■■■□□ 2.42
Trpm1Q2TV84 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Trpm1Q2TV84 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Trpm1Q2TV84 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC30.14■■■□□ 2.42
Trpm1Q2TV84 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Trpm1Q2TV84 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
Trpm1Q2TV84 AC165080.2-201ENSMUST00000217491 1530 ntBASIC30.14■■■□□ 2.41
Trpm1Q2TV84 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
Trpm1Q2TV84 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
Trpm1Q2TV84 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
Trpm1Q2TV84 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Trpm1Q2TV84 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Trpm1Q2TV84 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Trpm1Q2TV84 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Trpm1Q2TV84 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC30.13■■■□□ 2.41
Trpm1Q2TV84 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC30.13■■■□□ 2.41
Trpm1Q2TV84 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC30.13■■■□□ 2.41
Trpm1Q2TV84 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC30.13■■■□□ 2.41
Trpm1Q2TV84 Gm18671-201ENSMUST00000214826 683 ntBASIC30.12■■■□□ 2.41
Trpm1Q2TV84 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Trpm1Q2TV84 Gm10209-201ENSMUST00000203397 1607 ntBASIC30.12■■■□□ 2.41
Trpm1Q2TV84 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Trpm1Q2TV84 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Trpm1Q2TV84 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Trpm1Q2TV84 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Trpm1Q2TV84 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC30.11■■■□□ 2.41
Trpm1Q2TV84 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
Trpm1Q2TV84 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Trpm1Q2TV84 AV356131-201ENSMUST00000206201 750 ntBASIC30.1■■■□□ 2.41
Trpm1Q2TV84 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Trpm1Q2TV84 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms