Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ebf1Q07802 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ebf1Q07802 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ebf1Q07802 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ebf1Q07802 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ebf1Q07802 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Ebf1Q07802 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ebf1Q07802 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.9■□□□□ 0.94
Ebf1Q07802 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.9■□□□□ 0.94
Ebf1Q07802 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.9■□□□□ 0.94
Ebf1Q07802 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ebf1Q07802 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ebf1Q07802 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ebf1Q07802 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ebf1Q07802 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ebf1Q07802 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.9■□□□□ 0.94
Ebf1Q07802 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ebf1Q07802 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ebf1Q07802 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ebf1Q07802 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ebf1Q07802 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Ebf1Q07802 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Ebf1Q07802 Gm9870-201ENSMUST00000063874 645 ntBASIC20.89■□□□□ 0.93
Ebf1Q07802 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ebf1Q07802 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
Ebf1Q07802 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ebf1Q07802 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ebf1Q07802 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.88■□□□□ 0.93
Ebf1Q07802 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ebf1Q07802 Gm6139-201ENSMUST00000079261 882 ntBASIC20.88■□□□□ 0.93
Ebf1Q07802 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.88■□□□□ 0.93
Ebf1Q07802 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Ebf1Q07802 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ebf1Q07802 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Ebf1Q07802 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ebf1Q07802 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Ebf1Q07802 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.87■□□□□ 0.93
Ebf1Q07802 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Ebf1Q07802 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ebf1Q07802 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ebf1Q07802 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ebf1Q07802 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ebf1Q07802 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.86■□□□□ 0.93
Ebf1Q07802 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ebf1Q07802 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.86■□□□□ 0.93
Ebf1Q07802 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.86■□□□□ 0.93
Ebf1Q07802 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Ebf1Q07802 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ebf1Q07802 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ebf1Q07802 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ebf1Q07802 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ebf1Q07802 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ebf1Q07802 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
Ebf1Q07802 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
Ebf1Q07802 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ebf1Q07802 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Ebf1Q07802 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ebf1Q07802 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ebf1Q07802 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Ebf1Q07802 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.84■□□□□ 0.93
Ebf1Q07802 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Ebf1Q07802 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ebf1Q07802 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ebf1Q07802 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.83■□□□□ 0.93
Ebf1Q07802 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ebf1Q07802 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ebf1Q07802 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ebf1Q07802 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ebf1Q07802 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.83■□□□□ 0.92
Ebf1Q07802 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ebf1Q07802 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ebf1Q07802 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.82■□□□□ 0.92
Ebf1Q07802 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Ebf1Q07802 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.82■□□□□ 0.92
Ebf1Q07802 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ebf1Q07802 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ebf1Q07802 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ebf1Q07802 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ebf1Q07802 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ebf1Q07802 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.81■□□□□ 0.92
Ebf1Q07802 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
Ebf1Q07802 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ebf1Q07802 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ebf1Q07802 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Ebf1Q07802 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ebf1Q07802 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ebf1Q07802 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ebf1Q07802 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ebf1Q07802 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.8■□□□□ 0.92
Ebf1Q07802 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ebf1Q07802 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ebf1Q07802 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Ebf1Q07802 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ebf1Q07802 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ebf1Q07802 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Ebf1Q07802 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Ebf1Q07802 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ebf1Q07802 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ebf1Q07802 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.79■□□□□ 0.92
Ebf1Q07802 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms