Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hist1h3bP84228 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.16■□□□□ 0.5
Hist1h3bP84228 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hist1h3bP84228 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hist1h3bP84228 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.15■□□□□ 0.5
Hist1h3bP84228 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.15■□□□□ 0.5
Hist1h3bP84228 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hist1h3bP84228 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hist1h3bP84228 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hist1h3bP84228 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Hist1h3bP84228 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Hist1h3bP84228 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hist1h3bP84228 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.14■□□□□ 0.49
Hist1h3bP84228 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hist1h3bP84228 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hist1h3bP84228 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Hist1h3bP84228 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Hist1h3bP84228 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hist1h3bP84228 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hist1h3bP84228 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hist1h3bP84228 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
Hist1h3bP84228 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hist1h3bP84228 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hist1h3bP84228 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hist1h3bP84228 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hist1h3bP84228 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.12■□□□□ 0.49
Hist1h3bP84228 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hist1h3bP84228 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hist1h3bP84228 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hist1h3bP84228 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.11■□□□□ 0.49
Hist1h3bP84228 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.11■□□□□ 0.49
Hist1h3bP84228 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hist1h3bP84228 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Hist1h3bP84228 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hist1h3bP84228 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hist1h3bP84228 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hist1h3bP84228 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hist1h3bP84228 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.1■□□□□ 0.49
Hist1h3bP84228 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hist1h3bP84228 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.1■□□□□ 0.49
Hist1h3bP84228 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hist1h3bP84228 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Hist1h3bP84228 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hist1h3bP84228 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hist1h3bP84228 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hist1h3bP84228 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Hist1h3bP84228 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.09■□□□□ 0.49
Hist1h3bP84228 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.09■□□□□ 0.49
Hist1h3bP84228 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hist1h3bP84228 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hist1h3bP84228 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hist1h3bP84228 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hist1h3bP84228 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Hist1h3bP84228 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hist1h3bP84228 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hist1h3bP84228 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Hist1h3bP84228 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Hist1h3bP84228 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hist1h3bP84228 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hist1h3bP84228 Gm10232-201ENSMUST00000089221 720 ntBASIC18.08■□□□□ 0.48
Hist1h3bP84228 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hist1h3bP84228 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hist1h3bP84228 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hist1h3bP84228 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hist1h3bP84228 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hist1h3bP84228 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Hist1h3bP84228 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hist1h3bP84228 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hist1h3bP84228 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hist1h3bP84228 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hist1h3bP84228 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.07■□□□□ 0.48
Hist1h3bP84228 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hist1h3bP84228 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hist1h3bP84228 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hist1h3bP84228 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hist1h3bP84228 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hist1h3bP84228 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hist1h3bP84228 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Hist1h3bP84228 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hist1h3bP84228 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hist1h3bP84228 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.06■□□□□ 0.48
Hist1h3bP84228 Gm10399-202ENSMUST00000202768 748 ntBASIC18.06■□□□□ 0.48
Hist1h3bP84228 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.06■□□□□ 0.48
Hist1h3bP84228 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hist1h3bP84228 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hist1h3bP84228 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hist1h3bP84228 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hist1h3bP84228 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hist1h3bP84228 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Hist1h3bP84228 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hist1h3bP84228 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Hist1h3bP84228 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
Hist1h3bP84228 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.05■□□□□ 0.48
Hist1h3bP84228 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hist1h3bP84228 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hist1h3bP84228 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Hist1h3bP84228 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hist1h3bP84228 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Hist1h3bP84228 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hist1h3bP84228 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms